Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02475 atggactttgacatggaaatggacatggacGTTCCCCTCCCCGAAGAACTCGAATTACTCGAATCAAGCTATCGTATCTACGAACAAGAAGATCATGACAATTACTATTCCCACCCTcctgaagacgaaaccgaaccccaacccgaacAACCTTCGCCAGATCTCGCGTCTCCCTCCGAACCCCAATCCGACAGCCTGAAACGTCCTCGTTCCAATTCGAGCTCCGATTTAGATTTGGATTTGGATTCTTCTGATGTAGAAAAACGGGAGAAAGTTAGGGTTAGGGTTGAAGATCCTCCCGCAGAAGAGGATTGGCTTCGGTATTCTCCTCCTCCTTCGGTTACGGTTGAAGAAGTGAGATTCTCCAAGGAGAAGACGTTATCGCGATACGCATCGGAGATTGACGGCGAATGTATGCCGGTAACTGCGCCCAATGGGGATAGGGTTTATACCAAGCTTGATAGATACTACGGAGAAGAGCGAGTTACGAAGCTGAATTGTAGAGGATATTCTTCTGATCTTGCTTTAGAACCGATTAGTGTTCTGTTTGAAAGGTTGGAGCAAGAGACATTCACCAAGACCTTGGAAGCTAGTTCTGAATCCCAAAGTTTTGTAGATGTTCCTCCAACACTAACGGTCCATGAGCAACTTTGGGTAGATAAATATGCTCCAAAATCGTTTACGGATCTTCTCAGTGATGAACAGACAAATCGTGAGGTACTCTTGTGGTTAAAACAATGGGATTCTACAGTGTTTGGTTCTGAAATTCGTAGTACATCAGACGATGTTTTGTCTGCATTGAAACGACATTCTTCTATTTCGCATAATCAGAAATCTCTGGGTTCAAATTTTCCCAGGACAAAAGGAGGGCACAATTGGAGTAGTAATAACAGGTATATAAATTCTAGAAGTACAGATGAGAGTGGTAATTCAAAGAATATTCAGGATATACGGAATACAAAGTCAAGGAATGTTGGTGCACCAGAACATAAGATCCTTCTGCTATGCGGACCCCCAGGTCTCGGTAAAACTACACTTGCACATGTAGCTGCTAGGCATTGTGGATATCATGTGGTGGAGGTTAATGCTAGTGATGATCGTTCTACATCAACGATTGAAGCAAAAATCCTTGATGTGGTTCAGATGAACTCTGTCTTGTCTGATTCAAAGCCAAAGTGTCTGGTGGTGGATGAAATTGATGGAGCCCTTAGTGATGGAAAAGGTGCTGTGGAAGTTCTTTTAAAGATGATTTCTGCTGAGAGGAAGCCTGATGCAGGGAAGCAAAGTTTGGATAAAGGACAAATGGAAAGGAAGTCATCAAAGAAAGGGCGGAAAACTGCGTCACTGTCAAGACCTGTGATTTGCATATGTAATGACCTATATGCACCTGCCTTAAGATCATTACGCCAAGTGGCCAAGGTTCATATATTTATTCAACCAACAATTACCCGGGTGGTAAGCAGACTAAAATATATATGTAACAAGGAGGGGGTGAAGGCCAATGCCATTGCACTCACTGCTTTAGCGCAATATACAGAATGTGATATACGCTCATGTTTGAACACTCTCCAATTTCTCTCCAAGAAGAAAGAAACCCTCAATGTGTTTGATATTGGTTCACAAGTTGTTGGTCAGAAGGACATGTCAAAAAATGTTATAGACATCTGGAAAGAGTTGTTCCAAAGAAAAAGGACAAAAAAGATCGATAGAAAATCTAATAATAGCAAGTTCTCTGAATTTGACACCTTGTACTCCCTTATATCATACCGAGGTGATAGTGACCTGATTCTGGATGGCATTCATGAAAATATTCTGCAGCTCAATTATCATGATCCAGTTATGCAGAAAACTGTCAAGTGCCTCAACAGTCTTGAAGTTTATGATCTGTTGCATCAATATATAATGCGTACACAACAAATGTCTCTCCTTGTTCATTTGCCTCCTGTAGCAATTACTGTACATCACATAGTAGCTCAAGTTCAGAAGCCAAACATTGAGTGGCCAAAGTCATATCACAGGTATCGAACAATGAATATGGAAAATATGGAGATTTTGAATACTTGGCATTACAAAATCCCACCACATATTGCAAGGCACTTGTCAGCTACTTCCTTTGTTGAAGACTTAATTTCTCCATTGTTACACATCCTGTCCCCACGAACCATAAGACCGGTGGCCTTGCAATTACTATCAGATAAGGAGAAGAATGATATTGCTCACTTAGTCAGCACAATGGTCTCATATGCTATAACATATAAGAAAATGAAATCAGATACGCTGCCTAATACCCTGAAGTATGAAGTAGCAGATGAGTTGGCTTTGTCTCTCTTTCCTGCTATCGGTAACTTTGTAAACTTTAAGGATTATACTTCAAACCATTATGTGCTTTCTTTAGCTATGAAGCAGGTTCTGGTGCATGAAGTTGAAAAGCATAAGATTTTACAAGCTAATGTCAAAGCTGTGGCTTTAGCAAATGGAGGGCATGGAGTTATTGACTCTGGAACTAACAACATTCCATTTGCCAATACCAATAATCATACAGCTGTAGTTGATATGGAAACCATTGGAAGTCAAGCTAATGTCTTAGCTAGGAAATCAAATGACAATCGCAAGACAGTTTTACCAAACTTGAGTCTAACTAAAATTTCAACTGCAACAGACAATGCAAAACTGCTTGACATGGGAAATAAGAAAAAACCATTAAGGAGTTCCTCAAGTTTCTTCGACAGGTGA 2733 0.3959 MDFDMEMDMDVPLPEELELLESSYRIYEQEDHDNYYSHPPEDETEPQPEQPSPDLASPSEPQSDSLKRPRSNSSSDLDLDLDSSDVEKREKVRVRVEDPPAEEDWLRYSPPPSVTVEEVRFSKEKTLSRYASEIDGECMPVTAPNGDRVYTKLDRYYGEERVTKLNCRGYSSDLALEPISVLFERLEQETFTKTLEASSESQSFVDVPPTLTVHEQLWVDKYAPKSFTDLLSDEQTNREVLLWLKQWDSTVFGSEIRSTSDDVLSALKRHSSISHNQKSLGSNFPRTKGGHNWSSNNRYINSRSTDESGNSKNIQDIRNTKSRNVGAPEHKILLLCGPPGLGKTTLAHVAARHCGYHVVEVNASDDRSTSTIEAKILDVVQMNSVLSDSKPKCLVVDEIDGALSDGKGAVEVLLKMISAERKPDAGKQSLDKGQMERKSSKKGRKTASLSRPVICICNDLYAPALRSLRQVAKVHIFIQPTITRVVSRLKYICNKEGVKANAIALTALAQYTECDIRSCLNTLQFLSKKKETLNVFDIGSQVVGQKDMSKNVIDIWKELFQRKRTKKIDRKSNNSKFSEFDTLYSLISYRGDSDLILDGIHENILQLNYHDPVMQKTVKCLNSLEVYDLLHQYIMRTQQMSLLVHLPPVAITVHHIVAQVQKPNIEWPKSYHRYRTMNMENMEILNTWHYKIPPHIARHLSATSFVEDLISPLLHILSPRTIRPVALQLLSDKEKNDIAHLVSTMVSYAITYKKMKSDTLPNTLKYEVADELALSLFPAIGNFVNFKDYTSNHYVLSLAMKQVLVHEVEKHKILQANVKAVALANGGHGVIDSGTNNIPFANTNNHTAVVDMETIGSQANVLARKSNDNRKTVLPNLSLTKISTATDNAKLLDMGNKKKPLRSSSSFFDR 910
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02475 910 MobiDBLite consensus disorder prediction 21 45 - -
Car04g02475 910 Gene3D - 480 550 - -
Car04g02475 910 CDD AAA 309 422 - -
Car04g02475 910 MobiDBLite consensus disorder prediction 1 15 - -
Car04g02475 910 Gene3D - 215 478 IPR027417 -
Car04g02475 910 MobiDBLite consensus disorder prediction 71 104 - -
Car04g02475 910 MobiDBLite consensus disorder prediction 56 70 - -
Car04g02475 910 MobiDBLite consensus disorder prediction 1 109 - -
Car04g02475 910 MobiDBLite consensus disorder prediction 424 445 - -
Car04g02475 910 Pfam ATPase family associated with various cellular activities (AAA) 333 459 IPR003959 GO:0005524|GO:0016887
Car04g02475 910 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 7 910 - -
Car04g02475 910 CDD HLD_clamp_RFC 480 538 - -
Car04g02475 910 SMART AAA_5 329 483 IPR003593 -
Car04g02475 910 MobiDBLite consensus disorder prediction 275 295 - -
Car04g02475 910 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 216 535 IPR027417 -
Car04g02475 910 MobiDBLite consensus disorder prediction 424 443 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g02475 327 527 Core DNA Replication Machinery Family AT5G22010 31.944 1.05e-14 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02475 K11269 - gmx:100785041 1274.23