Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02459 ATGGGTTCAGCCACTACAGAAAATGGATATATAAGTCTCACACCAGAGTCAGAGACACAACAAAGCAACAATTCAAATTCTCTCTTTGATGAATCTAGTAGCATAGCCAACAAAGTAGGAAGGGTTTTGTATCCTCATCCAGTTCATGTTTGGCCAGCAATTATCACTACCACATTCACTCTTAGGATTACTCCGTTTGCGAAAAACTCGACCGGTTCGGGTGATGGAATGGCATTAGTATTTGCACAAGATAATAGGCCTTCACCAAATGATAGTTATGGTTCTTATCTTGGCATGTTTGATAGGTCTACACAAGGTGGGAATTTTCAACAAATAGGTGTGGAGTTAGACACATACATGAATGAATTTGATCCAGATGGAAACCACATTGGCATAATCACAACAAGCATAACAAATGCAGTTGCTTTTCATAGTCTCAACAGCACTTTTGTTGATCTCAAAAGTGGAAGAGACATTGTTGTTAAAGTTGACTATAATGGATGGACTAGAATGATATTTGTGTCAATAGGATACTCAAATAGTCAAATAAAGAGTGTTCTCAATCATTCAATTACATTACCTGATATAATACCAAGCTCAGTTTATGTTGGTTTCACAGCCTCAACTGGAAAAACTTTTCCTGAAACTCATCAAGTGCTCAATTGGGTCTTCACATCAGTTCCATTGCCTGTTCTTTCTTTGAAACATAGTGAACTTGGAAAAATCAAGATCATGCTATTGATAATTTTTATACCAGTTCTTGTGTCAATGAGTTTACTTCCTCTTATTTGGGAAGCTTGGAAGAAAAGATGTGAGAAGGGTGACCGGAAAGAGGACATAGAAAGGCTATCGATGACAGCTGCGGATGCGCCTAAGATGTTCAGTTACAAGCAACTGTCGAAAGCGACGTGCAATTTTAGAAAAGAAAATCTTGTGGGAAGAGGTGGATTTGGAAGTGTTTATAAAGGTGTCTTATTGGAGTGTGGAAAAAGTATAGCAGTAAAGAAAATCTCAGCTACCTCTAAGCAAGGTGAAAGAGAGTTCTTAGCTGAAATATGTACCATAGGACGTCTTCGACACAAAAACTTAGTACAACTCCAAGGATGGTGCAATGAAGGCAAGAATCTTCTCTTGGTTTATGATTACATGCAAAATGGAAGCCTTGATCACTTCATAGGCAACAATGAGATTCTAGATTGGCAAACAAGGCACAAGATATTAACAGGATTAGCATCATCATTACTTTACCTTCATGAAGAATGTGGAAATCCTGTAGTTCATAGAGATGTCAAACCTAACAACATAATGCTAGATTCTAATTACAATCCTCATTTAGGAGATTTTGGTCTAGCAAGATTACTAAAAAATGAGGACTCAGTAACTACAAATTTAGCAGGAACACCAGGCTATTTAGCCCCTGAAATAGGGTTCACAGGTAAAGCAACACCAGAATCAGATGTTTATAGCTTTGGTATGGTTGTACTTGAATTAATATGTGGTAAAAGATCAAAAAGGGTAATGGAAGATAATAGTTTGGTGGACTATGTTTGGAATTTTCATGCTCAAAATCAAATTCTTGCGTGTGTTGATAAACAATTGAAAAATCAATTTGATGTGGAAGAAGCTAAAAGGTGTTTGATGGTTGGATTGGCTTGTTTGCATCCAGATTCATCGTTTAGGCCAAAGATGAGGAAAGTTGTGCAAATTTTTTTGAATGCAAATGAGTCTTTGATGGAATTACCTGAAATGAGACCAACTGGAGTTTATGTGTCAGTTTCCTGTACATCAATCACAGAGTTTGTTTCAAGAACTGAGTTAGAGCTTCATTCATCCACAACATCATCAATGGAAAAAATTTCTAATTGTACAGTATGA 1875 0.3685 MGSATTENGYISLTPESETQQSNNSNSLFDESSSIANKVGRVLYPHPVHVWPAIITTTFTLRITPFAKNSTGSGDGMALVFAQDNRPSPNDSYGSYLGMFDRSTQGGNFQQIGVELDTYMNEFDPDGNHIGIITTSITNAVAFHSLNSTFVDLKSGRDIVVKVDYNGWTRMIFVSIGYSNSQIKSVLNHSITLPDIIPSSVYVGFTASTGKTFPETHQVLNWVFTSVPLPVLSLKHSELGKIKIMLLIIFIPVLVSMSLLPLIWEAWKKRCEKGDRKEDIERLSMTAADAPKMFSYKQLSKATCNFRKENLVGRGGFGSVYKGVLLECGKSIAVKKISATSKQGEREFLAEICTIGRLRHKNLVQLQGWCNEGKNLLLVYDYMQNGSLDHFIGNNEILDWQTRHKILTGLASSLLYLHEECGNPVVHRDVKPNNIMLDSNYNPHLGDFGLARLLKNEDSVTTNLAGTPGYLAPEIGFTGKATPESDVYSFGMVVLELICGKRSKRVMEDNSLVDYVWNFHAQNQILACVDKQLKNQFDVEEAKRCLMVGLACLHPDSSFRPKMRKVVQIFLNANESLMELPEMRPTGVYVSVSCTSITEFVSRTELELHSSTTSSMEKISNCTV 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02459 624 ProSitePatterns Serine/Threonine protein kinases active-site signature. 425 437 IPR008271 GO:0004672|GO:0006468
Car04g02459 624 CDD STKc_IRAK 312 570 - -
Car04g02459 624 Gene3D Phosphorylase Kinase; domain 1 267 382 - -
Car04g02459 624 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE IX.1-LIKE 16 605 - -
Car04g02459 624 Gene3D Transferase(Phosphotransferase) domain 1 383 584 - -
Car04g02459 624 SUPERFAMILY Concanavalin A-like lectins/glucanases 2 227 IPR013320 -
Car04g02459 624 CDD lectin_legume_LecRK_Arcelin_ConA 2 226 IPR001220 GO:0030246
Car04g02459 624 Pfam Legume lectin domain 3 227 IPR001220 GO:0030246
Car04g02459 624 SMART serkin_6 306 571 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g02459 624 ProSitePatterns Protein kinases ATP-binding region signature. 312 336 IPR017441 GO:0005524
Car04g02459 624 ProSitePatterns Legume lectins beta-chain signature. 112 118 IPR019825 -
Car04g02459 624 Pfam Protein kinase domain 307 568 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g02459 624 PANTHER - 16 605 - -
Car04g02459 624 SUPERFAMILY Protein kinase-like (PK-like) 290 600 IPR011009 -
Car04g02459 624 Gene3D - 1 234 - -
Car04g02459 624 ProSiteProfiles Protein kinase domain profile. 306 571 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g02459 624 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g02459 Car-Chr4 43901399 43904272 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g02459 40 605 Receptor kinase-like Gene Family AT5G55830 38.871 4.96e-119 367
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Car04g02459 Pkinase 1.5e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02459 - - ccaj:109810929 893.649