Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car04g02452 | ATGGGGAACACATGTGTTGGTCCTAGCATTTCAAAGAATGGTATTATTCAATCATTTTCTGCGGCAATTTGGCGGTCGCAGTCACCCGATCCTGAAGGATCAGTGTCTACTAGAGGATCTGTAAATGATGTAACAACCAATGAGCCTGAATCTCCTTTGCCTGTTCAAAACAAACCTCCTGAGCAGATAACTATGCCGAaaccagaaacaaaacaagagacgaaatccaaagcggaatcagaaccagaaccagaGAAGAAGAAACAAAGGAAACCTTCTGTGAAGAGAGTTTCTAGTGCAGGACTTCGTGTTGATTCGGTGTTGCAGAGAGAAACCGATAATCTCAAGGAATTCTTTAGTTTGGGGAAGAAACTTGGACAAGGTCAGTTCGGGACAACGTTCTTGTGTGTGGAGAAAGAAACTGGACGTGAGTATGCTTGTAAATCTATGGCAAAGAGGAAGCTCGTAACCGATGAAGATGTTGAGGATGTGAGAAGAGAAATTCAGATAATGCACCATTTAGCTGGACATCCTAATGTTATATCGATTAAAGGTGCTTATGAGGATGCCATGGCTGTCCATGTTGTGATGGAGTTATGTGCAGGCGGTGAGCTTTTTGATAGGATTATTCAGCGCGGGCATTATACCGAAAGAAAGGCAGCTGAACTTATTAGGACTATAGTTGGGGTTGTTGAAGCTTGTCATTCTCTAGGTGTGATGCATCGGGACCTTAAGCCTGAAAATTTTCTATTTGTCAGTCAGCAAGAGGATTCACTACTCAAAACTATTGACTTTGGATTATCTGTGTTCTTTAAGCCAGGTGATACATTTATTGATGTAGTTGGCAGTCCATATTATGTTGCCCCAGAAGTTTTGAAAAAGCGTTATGGTCCCGAAGCCGATGTTTGGAGTGCTGGAGTTATCCTTTACATTCTTTTGAGTGGAGTACCTCCATTTTGGGCTGAAAGTGAACAAGGGATATTTGAACAGGTTTTGCGTGGAGATCTTGACTTTGATTCAGATCCCTGGCCTGGAATTTCTGAAAGTGCAAAAGATTTAGTAAGGAAAATGCTTGTCCGTGACCCTAAAAGGCGGATTACTGCACATCAAGTATTATGTCATCCTTGGGTTCAAGTTGATGGTGTAGCTCCTGACAAGCCACTTGATTCCGCTGTATTAAGTCGCTTGAAGCAATTTTCTGCTATGAACAAGCTCAAGAAAATGGCTCTTATAGTTATTGCAGAGAGCTTATCCGAAGAAGAATTGGCTGGCTTAAAAGAAATGTTTAAGATGATAGATACAGATAACAGTGGTCAAATCACTTTTGAAGAACTTAAAGTTGGTTTGAAAAAAGTTGGTGCTAATCTTAAGGAGTCTGAAATTTATGATTTAATGCAAGCGGCCGATGTAGATAACAGTGGGACGATTGATTACGGTGAGTTCATTGCCGCAACATTGCATCTTAACAAGATCGAAAGAGAAGATCATCTATTCGCAGCCTTTTCTTACTTTGATAAAGATGGAAGTGGCTATATTACTCAAGAAGAACTTGAACAAGCTTGCGATGAGTTTGGCATTAAAGATGTTCGTTTGGAAGAGATAATCAAGGAAATTGATGAGGATAATGACGGGCGCATAGACTATAACGAGTTCGTAGCTATGATGCAGAAAGGAAATGTTCCTATGATTGGTAAGAAAGGCCTGGAAAATAACTTCAGCATTCGTTTCAAGGAGGCATTAAAATTGTAG | 1749 | 0.3928 | MGNTCVGPSISKNGIIQSFSAAIWRSQSPDPEGSVSTRGSVNDVTTNEPESPLPVQNKPPEQITMPKPETKQETKSKAESEPEPEKKKQRKPSVKRVSSAGLRVDSVLQRETDNLKEFFSLGKKLGQGQFGTTFLCVEKETGREYACKSMAKRKLVTDEDVEDVRREIQIMHHLAGHPNVISIKGAYEDAMAVHVVMELCAGGELFDRIIQRGHYTERKAAELIRTIVGVVEACHSLGVMHRDLKPENFLFVSQQEDSLLKTIDFGLSVFFKPGDTFIDVVGSPYYVAPEVLKKRYGPEADVWSAGVILYILLSGVPPFWAESEQGIFEQVLRGDLDFDSDPWPGISESAKDLVRKMLVRDPKRRITAHQVLCHPWVQVDGVAPDKPLDSAVLSRLKQFSAMNKLKKMALIVIAESLSEEELAGLKEMFKMIDTDNSGQITFEELKVGLKKVGANLKESEIYDLMQAADVDNSGTIDYGEFIAATLHLNKIEREDHLFAAFSYFDKDGSGYITQEELEQACDEFGIKDVRLEEIIKEIDEDNDGRIDYNEFVAMMQKGNVPMIGKKGLENNFSIRFKEALKL | 582 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car04g02452 | 582 | CDD | EFh | 425 | 484 | IPR002048 | GO:0005509 | |
Car04g02452 | 582 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 420 | 455 | IPR002048 | GO:0005509 | |
Car04g02452 | 582 | ProSitePatterns | EF-hand calcium-binding domain. | 505 | 517 | IPR018247 | - | |
Car04g02452 | 582 | ProSitePatterns | EF-hand calcium-binding domain. | 539 | 551 | IPR018247 | - | |
Car04g02452 | 582 | Gene3D | Phosphorylase Kinase; domain 1 | 121 | 204 | - | - | |
Car04g02452 | 582 | MobiDBLite | consensus disorder prediction | 23 | 52 | - | - | |
Car04g02452 | 582 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 492 | 527 | IPR002048 | GO:0005509 | |
Car04g02452 | 582 | CDD | STKc_CAMK | 118 | 376 | - | - | |
Car04g02452 | 582 | PANTHER | SERINE/THREONINE-PROTEIN KINASE | 66 | 566 | - | - | |
Car04g02452 | 582 | ProSitePatterns | EF-hand calcium-binding domain. | 469 | 481 | IPR018247 | - | |
Car04g02452 | 582 | Gene3D | - | 402 | 561 | - | - | |
Car04g02452 | 582 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 239 | 251 | IPR008271 | GO:0004672|GO:0006468 | |
Car04g02452 | 582 | ProSiteProfiles | Protein kinase domain profile. | 119 | 377 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Car04g02452 | 582 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 530 | 561 | IPR002048 | GO:0005509 | |
Car04g02452 | 582 | SUPERFAMILY | Protein kinase-like (PK-like) | 119 | 378 | IPR011009 | - | |
Car04g02452 | 582 | MobiDBLite | consensus disorder prediction | 68 | 90 | - | - | |
Car04g02452 | 582 | ProSitePatterns | Protein kinases ATP-binding region signature. | 125 | 148 | IPR017441 | GO:0005524 | |
Car04g02452 | 582 | SUPERFAMILY | EF-hand | 417 | 557 | IPR011992 | - | |
Car04g02452 | 582 | SMART | serkin_6 | 119 | 377 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Car04g02452 | 582 | Gene3D | Transferase(Phosphotransferase) domain 1 | 205 | 401 | - | - | |
Car04g02452 | 582 | PANTHER | CALCIUM-DEPENDENT PROTEIN KINASE 2 | 66 | 566 | - | - | |
Car04g02452 | 582 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 456 | 491 | IPR002048 | GO:0005509 | |
Car04g02452 | 582 | CDD | EFh | 496 | 556 | IPR002048 | GO:0005509 | |
Car04g02452 | 582 | ProSitePatterns | EF-hand calcium-binding domain. | 433 | 445 | IPR018247 | - | |
Car04g02452 | 582 | SMART | efh_1 | 460 | 488 | IPR002048 | GO:0005509 | |
Car04g02452 | 582 | SMART | efh_1 | 496 | 524 | IPR002048 | GO:0005509 | |
Car04g02452 | 582 | SMART | efh_1 | 530 | 558 | IPR002048 | GO:0005509 | |
Car04g02452 | 582 | SMART | efh_1 | 424 | 452 | IPR002048 | GO:0005509 | |
Car04g02452 | 582 | Pfam | Protein kinase domain | 120 | 377 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Car04g02452 | 582 | Pfam | EF-hand domain pair | 425 | 485 | IPR002048 | GO:0005509 | |
Car04g02452 | 582 | Pfam | EF-hand domain pair | 495 | 556 | IPR002048 | GO:0005509 | |
Car04g02452 | 582 | MobiDBLite | consensus disorder prediction | 23 | 99 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Car04g02452 | Car-Chr4 | 43659966 | 43669405 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Car04g02452 | 1 | 577 | EF-hand Containing Proteins | AT5G04870 | 76.020 | 0.0 | 945 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | CAMK_CDPK | Car04g02452 | Pkinase | 2.7e-73 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car04g02452 | K13412 | - | gmx:100797449 | 1020.38 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Car04g02452 | 04 | 43659966 | 43669405 | Car04g02452 | 04 | 43659966 | 43669405 | ECH |