Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02441 ATGACAACAGCAAAAGAAACTTCAAACTTAGATCTCATACGCTATCATCTCTTAGATAACAGCACCACTTTCTTCACTTTCCTTGAAAGCTATGATTTGGTAGCAGACATGGAGTTCTTTACTAATAATACTTCTCCAACAAATGAAACAAAGCCTTCAAAGGAAAGGAATTCACCTGAACCAATTACTTTGGTGTCAAAGGAGACAAAGAAAGAAAAATGTGTTGTTGATGCGACGACGAGGCGTTACAGAGGAGTAAGGAGAAGGCCATGGGGGAAATTTGCTGCTGAGATTCGCGATCCGTCGAGGAAAGGAAGCAGGGTTTGGTTAGGTACATTTGATTGTGAAATTGATGCTGCAAAAGCTTATGATTCTGCTGCTTTCAAAATGAGGGGTCAGAAAGCTATATTGAATTTTCCTTTGGAGGCTGGAGTTTGTCATCCTAAGCCTAATTGTTGTGGAAAGAAAAGGAGAAGAGAGAGTGAAATTGAAGCTACAAGAAGTTCAACTTCAAGTTCATGA 522 0.3966 MTTAKETSNLDLIRYHLLDNSTTFFTFLESYDLVADMEFFTNNTSPTNETKPSKERNSPEPITLVSKETKKEKCVVDATTRRYRGVRRRPWGKFAAEIRDPSRKGSRVWLGTFDCEIDAAKAYDSAAFKMRGQKAILNFPLEAGVCHPKPNCCGKKRRRESEIEATRSSTSSS 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02441 173 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 5 163 - -
Car04g02441 173 ProSiteProfiles AP2/ERF domain profile. 82 140 IPR001471 GO:0003700|GO:0006355
Car04g02441 173 Gene3D AP2/ERF domain 81 142 IPR036955 GO:0003700|GO:0006355
Car04g02441 173 SMART rav1_2 82 146 IPR001471 GO:0003700|GO:0006355
Car04g02441 173 Pfam AP2 domain 82 132 IPR001471 GO:0003700|GO:0006355
Car04g02441 173 PRINTS Ethylene responsive element binding protein signature 83 94 IPR001471 GO:0003700|GO:0006355
Car04g02441 173 PRINTS Ethylene responsive element binding protein signature 122 142 IPR001471 GO:0003700|GO:0006355
Car04g02441 173 SUPERFAMILY DNA-binding domain 82 142 IPR016177 GO:0003677
Car04g02441 173 MobiDBLite consensus disorder prediction 42 61 - -
Car04g02441 173 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF105 5 163 - -
Car04g02441 173 CDD AP2 90 140 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g02441 Car-Chr4 43209454 43210065 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g02441 1 159 AP2-EREBP Transcription Factor Family AT5G07580 40.741 6.11e-40 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Car04g02441 AP2 1.9e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02441 - - gmx:100305726 201.445
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02312 03 69101175 69101752 Car04g02441 04 43209454 43210065 PCT