Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02438 ATGGGCTCGGTTGAAAACTACCACGTGATCGAGCTAGTCGGCGAGGGTTCCTTCGGTAAAGTCTACAAAGGAAGACGAAAGCACACCGGACAGACTGTTGCGATGAAGTTCATTATGAAACACGGTAAAACTGAAAAGGATATTCATAATTTGAGACAAGAAATCGAGATATTGAGAAAATTGAAGCATGAAAATATTATTCAAATGCTTGATTCCTTTGAAAGCCCACAAGAGTTTTGTGTTGTCACGGAATTTGCACAAGGTGAGCTATTTGAGGTTCTTGAGGATGATAAGTGCCTCCCTGAAGAACAAGTTCAAGCAATTGCAAAGCAATTGGTAAGAGCCTTACATTATTTGCATTCTAACCGGATCATCCATCGTGATATGAAGCCCCAGAATATTCTCATTGGTTCTGGATCTATTGTCAAGCTTTGTGATTTTGGGTTTGCACGTGCGATGTCCACAAACACAGTTGTTTTGCGATCTATAAAAGGTACTCCATTATACATGGCTCCGGAGCTTGTCCGGGAACAACCTTACAACCACACTGTAGATTTATGGTCTCTTGGTGTTATACTGTATGAGTTATTTGTTGGCCAACCACCATTTTACACAAATTCTGTTTATGCTCTCATCAGACACATTGTTAAGGATCCAGTTAAATATCCTGATCGCATGACTCCAAATTTCAAAAGCTTTTTAAAGGGTTTGCTTAACAAGGCACCAGAAAGTCGACTAACTTGGCCTGCTCTTCTTGAACACCCATTTGTTAAAGAAACTATCGACGAACTTGAAGCCAGGGAATTGCCTGAGATAAGTAGTTCGCCCAATGATAGCAATACATCACAGAGGGTAGAAGGAAAAACCATTCAAACTTCCTCAGGCAAAGACAATCGTGCAACCGGTTTGGAGGAGCATGTTGCTTCACCGCTAAAGAATGAAGCTCAGTTAAATGGTCCTAACATGAACAAAATCAATTCTAAAGTGCTTGATGAGTCTCCCGGTTTTTCTAATCAAAATGATGTAGGAGAGTCAGGCTGCCAAAGACTGGACAAACTTGAAAGTAATTCTCGCACTGTCAAAGGTGCAAAAATAATTGGTCAAGATAATGAAGCATTGGGACATGTTCTGCAACCACTGAAAAGATGGTCAAAGGGATCTCAAAATATTTGCAGTGATCAAGATCTTCCTGATTCAAACCAGTCATTGAGAATTCTCTCAAATTTAGTTGCTGCCGGTGTCTTCAGTTCTACTGGACAAATAGATGAACTAATAAGCGAGCTCCTTTTGTTCACCAGATCTGTTGTAGCAATGAAATCTGCTGAAATTATTGACTTGATGACAAAGGGTTTCTCCATTACTAAAGTTTTGCTAGATAATGGTGGGAGTTGCTGGTTAAGCTCATATTTAAATCACTGGATTGAATTGGTTGAAATCTATTCTCAGGTTGTAACTTCGATAAATGATGCATCTGGAAGAATTCTGTATGAGTCTAGTGCATGCATTACAGTCATGTTGTCTAAAGTTGCTCAGGTGCTTAGATCATCTCCTCAAATTTCAGGTTCAGAGACACTGAACGAAACAGCTAATAGAATTATAGAGCATGCGAAAACATCTGGTTTAGTGGACCATTTATGCCTGTGCTTAGCAACTTCAGGCTCGAGTCTTATTGCAGGTTCTTCCAATATGCTACGGGCTGCTTCTGAAGCATGTAGAGCTGTCTGGTCTTTGGTTAATGCTCTGGATGTCCTTTTTATGAAAAAAAGTGCCGTTTTGTTTCCCATTAATGCATTGTGGAGTCATTCTTTACAGAGGATGGAAATTATGGATCATGGACAAGATCCTTTGTTTGATGCAGAATCAACAAAAATAGTTGATTCAATGACAAGGGCATTTCTGAGATCCAAAGGTGTTCAGGTTGCTGTTTACTATTGTTTTCACCAACGTATTGAGTCTGCAACAATTTGTGGTCTTCAGCTTTTGTCAAGGTGCTGTCTCCATAGTGGAATTGTTCCAGCCGTTCTTTGTGGTCTGCCTAGTTCTCTTCCTGTGACTACTATTGTTAGTGGCGGCGGTGATGGAACAATTGTTTCAGAGATTTTCTCAGTTTTGTCAATATGCAGTTCTTCTCTCAACAAAGATGCACACAGTGTAGAACCAAGCCACACTAAATGCAAGTTAGCAAATCCTTCTGCTCTGGTTCGTCATTCATGTCTCATTCTTGCAATAATTGCACGATATTTGAAGTCAACTGGAAGAAACTCTGCAATTTGTATGCTTACCAGCTCACCAAAGAAGCAGCTTGCTCGACTTTCAGTTCTTGCTCATTATATTTCTTCTGATGATAAAGCAAAAGCCTCTTTCCAACTTCAAAGTGGATCAGCCATGTTGGCTTTGGCATCCATTCTTTCCCTCGAATCTGGGACTTTGATGGAGTCTCCGATATCTGAAACTGCTATTCCCTTAATTCCTCGAACTTCTACACTAAGTGACCATCTTAAATTTTCATCAGGAAATGAAAATGAACTGGACACTGGTAATGTTAATGGAAAGCTCCCGTTTTGGCTAGGGGCAAGAGATGGGTGTGTTGGTCTTTTAGATTCCAAACTCAAGTGGGGAGGACCATTAGCTGTTCAGCAGTTTTGTGCAAGTGGTATACCTCTTCTTCTTATTGGCTTATTAAGCAATGGGTTTTCAAATGCTTCTCAAGGAAAAGATTGCCTAAACGATATAGTTGGATTGTCTCCTATAGGTGTTGTGTGGACAATTTCTTCATTATGTCATTGTCTCTCTGGTGGTGCTTTGATTTTTCGTCAGATTTTGATTAAGAACGAACATGTTAAGCTCATATCCAACTTAATATGTGATGTTCATCTTAAATTGATAAAAGGCTGGACTGGACCTGGTGGAGGGAGAGTAGGAGTCCGAGATCTTATCAATGCAGTAATAGATCTCTTAGCATTTCCTTTTGTTGCTGTTCAAAATGCACCTGGCTTGCCATCAGCCACTGCGTCTGTCAGCAGTGGGTTTCTTCTTAACGTTGGTTCTCCTGGCCAGAGAGTATGCCTGGAAGACAAAGATACAGTCAAGGCAATAGAAGAAGACATGGGCAAATACATTAAGATCCTTATGGAGGCGGGTGTGCCTGGTATTGTCCTTCGATGTCTAGATCATATGGAGTTGAATGATTTGGGTAGGCCTGTGGCCTTTTTGGCTAAAATGGTGTGCCACCGACCTTTAGCAGTCCAACTTGTGAGTAAAGGTCTTCTGGATCCAAATAGGATGAGAAGGTTGTTTGACAGCACAGGCCCAAAAGTGGTTATGCTAGATGCTCTTATGATAATTTCTGATCTTGCTCGTATGGACAAGGGATTCTATGAGTACATTAAAGGTGCTTCTATTTTGGAGTTCTTAAAAAGTTTTCTTTCACATGAGGATCCTAATATGCGTGCCAAAGCTTGCAGTGCTCTTGGAAACATGTGTCGTCACAGTGCCCATTTTTATAGTTCTCTTGCAAGATATCAAATCGTTAGTATCCTTATTGATCGGTGTTCTGATCCTGACCAACGAACAAGGAAGTTTGCTTGTTTTGCTATTGGAAATGCGGCTTACCATAATGACGTGTTGTATGAAGAGCTGAGGAGATCGATTCCTCATTTGGCAAATTTGTTGCAAATGGCAGAGGAGGACAAAACTAAGGCAAATGCAGCAGGTGCACTTAGCAATCTGGTTCGTAACTCTGACAAACTTTGTGAAGACATTGTGTCGAAAGGAGCTGTTCAGTCTCTCCTGAAGTTAATTTCTGATTATGCGGTATCAGCACTAAATCCTACCAGAAATGATTCAACAAACGAATCTCCTTTAAAGATAGCTCTCTTTTCCCTAGCTAAGATGTGTGCCCATCCACTCTGCAGACAGTTCATCCGTTCATCACCTTTGTTCCCTGTAATTGGAAAGCTTCAGCAGTCTCCAGAATCATCCATTGCCAAATATGCATCTGTCATTGTCAGCAAAGTTGCTGAACCTTGA 4029 0.4073 MGSVENYHVIELVGEGSFGKVYKGRRKHTGQTVAMKFIMKHGKTEKDIHNLRQEIEILRKLKHENIIQMLDSFESPQEFCVVTEFAQGELFEVLEDDKCLPEEQVQAIAKQLVRALHYLHSNRIIHRDMKPQNILIGSGSIVKLCDFGFARAMSTNTVVLRSIKGTPLYMAPELVREQPYNHTVDLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDRMTPNFKSFLKGLLNKAPESRLTWPALLEHPFVKETIDELEARELPEISSSPNDSNTSQRVEGKTIQTSSGKDNRATGLEEHVASPLKNEAQLNGPNMNKINSKVLDESPGFSNQNDVGESGCQRLDKLESNSRTVKGAKIIGQDNEALGHVLQPLKRWSKGSQNICSDQDLPDSNQSLRILSNLVAAGVFSSTGQIDELISELLLFTRSVVAMKSAEIIDLMTKGFSITKVLLDNGGSCWLSSYLNHWIELVEIYSQVVTSINDASGRILYESSACITVMLSKVAQVLRSSPQISGSETLNETANRIIEHAKTSGLVDHLCLCLATSGSSLIAGSSNMLRAASEACRAVWSLVNALDVLFMKKSAVLFPINALWSHSLQRMEIMDHGQDPLFDAESTKIVDSMTRAFLRSKGVQVAVYYCFHQRIESATICGLQLLSRCCLHSGIVPAVLCGLPSSLPVTTIVSGGGDGTIVSEIFSVLSICSSSLNKDAHSVEPSHTKCKLANPSALVRHSCLILAIIARYLKSTGRNSAICMLTSSPKKQLARLSVLAHYISSDDKAKASFQLQSGSAMLALASILSLESGTLMESPISETAIPLIPRTSTLSDHLKFSSGNENELDTGNVNGKLPFWLGARDGCVGLLDSKLKWGGPLAVQQFCASGIPLLLIGLLSNGFSNASQGKDCLNDIVGLSPIGVVWTISSLCHCLSGGALIFRQILIKNEHVKLISNLICDVHLKLIKGWTGPGGGRVGVRDLINAVIDLLAFPFVAVQNAPGLPSATASVSSGFLLNVGSPGQRVCLEDKDTVKAIEEDMGKYIKILMEAGVPGIVLRCLDHMELNDLGRPVAFLAKMVCHRPLAVQLVSKGLLDPNRMRRLFDSTGPKVVMLDALMIISDLARMDKGFYEYIKGASILEFLKSFLSHEDPNMRAKACSALGNMCRHSAHFYSSLARYQIVSILIDRCSDPDQRTRKFACFAIGNAAYHNDVLYEELRRSIPHLANLLQMAEEDKTKANAAGALSNLVRNSDKLCEDIVSKGAVQSLLKLISDYAVSALNPTRNDSTNESPLKIALFSLAKMCAHPLCRQFIRSSPLFPVIGKLQQSPESSIAKYASVIVSKVAEP 1342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02438 1342 SMART arm_5 1205 1245 IPR000225 GO:0005515
Car04g02438 1342 SMART arm_5 529 579 IPR000225 GO:0005515
Car04g02438 1342 SMART arm_5 1246 1300 IPR000225 GO:0005515
Car04g02438 1342 SMART arm_5 1122 1162 IPR000225 GO:0005515
Car04g02438 1342 PANTHER PROTEIN KINASE RELATED 1 1340 IPR045193 GO:0004674
Car04g02438 1342 MobiDBLite consensus disorder prediction 267 300 - -
Car04g02438 1342 Gene3D - 1067 1339 IPR011989 -
Car04g02438 1342 CDD STKc_STK36 5 257 - -
Car04g02438 1342 ProSitePatterns Protein kinases ATP-binding region signature. 13 40 IPR017441 GO:0005524
Car04g02438 1342 Gene3D Transferase(Phosphotransferase) domain 1 2 322 - -
Car04g02438 1342 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Car04g02438 1342 Pfam Protein kinase domain 7 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g02438 1342 SUPERFAMILY ARM repeat 1035 1339 IPR016024 -
Car04g02438 1342 Coils Coil 41 61 - -
Car04g02438 1342 ProSiteProfiles Protein kinase domain profile. 7 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g02438 1342 Pfam HEAT repeats 1136 1240 - -
Car04g02438 1342 SMART serkin_6 7 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g02438 1342 Coils Coil 1210 1230 - -
Car04g02438 1342 SUPERFAMILY Protein kinase-like (PK-like) 5 288 IPR011009 -
Car04g02438 1342 MobiDBLite consensus disorder prediction 272 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g02438 Car-Chr4 43111776 43126247 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g02438 4 269 AGC Kinase Gene Family AT3G08720 37.591 1.46e-45 170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK ULK_Fused Car04g02438 Pkinase 9.2e-78 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02438 K06228 - gmx:100792102 2224.13