Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02421 ATGTCTATGTTGGATCTCAACGTTGACATAATCGATGAAACATCAGATTATTCCTCAAACAATTCTTCTCCTTTAATTTGTGACCTGTTGAAGAAAGAAAAAGATGTCTCAGATATAATCACGAGGACCCTTTTCCCTGTGAGTGCTGATAGAGGAGGTAGAGTATCTGATTCCATGACTCAAAATGGACTTAAAATCTTGCAACAAAAGAAACCTCAAGTTAGAAAAAGTAGGAGAGGACCAAGGTCTCGCAGTTCACAGTATAGGGGTGTTACCTTATACCGTAGGACTGGTAGATGGGAATCACATATTTGGGATTGTGGGAAGCAGGTCTATTTGGGTGGATTTGACACTTCTCATGCTGCTGCAAGAGCATATGATAGAGCTGCTATTAGGTTTAGGGGAGTTGATGCTGATATAAACTTTATTTTCAGTGATTATGAGGAGGATTTGAAGCAGATGAAAGGTTTGAGTAAGGAAGAATTTGTACTAAGAGTTCGTAGACAAACTAATGGAATCTCAAAGAGAAATTCAACATTCAGAAGTGCATTAGTTCTTCACAAATGTGATCTACGAGTTAGACCTTTTGTTGGCAAAACATTTTGTCATAAGCCACCCATAAAGCGTGATCATGAAGTAGAAACCAGTTGTAATCCCTCTACTACTTATAAGGGAGGGATAAATGCAAATTCTAACAAAACAGGCAATTTACATAATCTTGATTTGAGTCTTGGGATTTCACCATCTTCCAAACAACTGATTAATAATGATTCTGGAGGTTGGTTTCCCTTTGGATGGACGACTTGTATGATACCCAACGAAAGGATACAATGa 834 0.3801 MSMLDLNVDIIDETSDYSSNNSSPLICDLLKKEKDVSDIITRTLFPVSADRGGRVSDSMTQNGLKILQQKKPQVRKSRRGPRSRSSQYRGVTLYRRTGRWESHIWDCGKQVYLGGFDTSHAAARAYDRAAIRFRGVDADINFIFSDYEEDLKQMKGLSKEEFVLRVRRQTNGISKRNSTFRSALVLHKCDLRVRPFVGKTFCHKPPIKRDHEVETSCNPSTTYKGGINANSNKTGNLHNLDLSLGISPSSKQLINNDSGGWFPFGWTTCMIPNERIQ 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02421 277 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR SMZ-RELATED 10 256 - -
Car04g02421 277 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 10 256 - -
Car04g02421 277 ProSiteProfiles AP2/ERF domain profile. 87 143 IPR001471 GO:0003700|GO:0006355
Car04g02421 277 Gene3D AP2/ERF domain 86 144 IPR036955 GO:0003700|GO:0006355
Car04g02421 277 MobiDBLite consensus disorder prediction 51 88 - -
Car04g02421 277 SMART rav1_2 87 149 IPR001471 GO:0003700|GO:0006355
Car04g02421 277 SUPERFAMILY DNA-binding domain 86 143 IPR016177 GO:0003677
Car04g02421 277 MobiDBLite consensus disorder prediction 54 68 - -
Car04g02421 277 Pfam AP2 domain 87 135 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g02421 Car-Chr4 42294943 42303875 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g02421 65 251 AP2-EREBP Transcription Factor Family AT5G60120 52.880 5.31e-49 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Car04g02421 AP2 6e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02421 K09284 - gmx:100776138 307.375