Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02401 ATGGCCAATACTGTGATTTTGTTGCTGCAATTATTTGCAAGGCTCTTATACTACACCCCTATGGCTATCCTTGTTGCTATCATCCTCTCTGCACTTCCTGGATTAATCGATGTAAATGAGGCTCACTATATCTGGAAGGTTGACAAATTAGACTTTCTTTCCTATATTGAAGCTTTCGTTGGTGTCTTGTTTGCATCTGTAGAGATTGGTCTCCTTGTAGTTAATTTGTATAATGTATTAATTTCATATTTTGTTTTGGATGTGGAAGTGACAATCTCATTTGTAAAGATACTAATACAATCAATTCGACATGGAGTAGGAATTCTAGGTAGAGTTCCAAGAACAGAAGCCTTCTGTGATGTAACTCAATATCCGATGGTTGTAAGCACGCCTGACATCATAGTGATTCTCATACGTTCTGGCTCACTCTGCTTTGGAAATGCCAATTTTGTCAAATAA 459 0.3725 MANTVILLLQLFARLLYYTPMAILVAIILSALPGLIDVNEAHYIWKVDKLDFLSYIEAFVGVLFASVEIGLLVVNLYNVLISYFVLDVEVTISFVKILIQSIRHGVGILGRVPRTEAFCDVTQYPMVVSTPDIIVILIRSGSLCFGNANFVK 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02401 152 PANTHER SULFATE TRANSPORTER 1 152 IPR001902 GO:0015301|GO:0016020|GO:0055085
Car04g02401 152 Pfam Sulfate permease family 1 55 IPR011547 GO:0016021
Car04g02401 152 Gene3D STAS domain 106 152 IPR036513 -
Car04g02401 152 PANTHER SLC26A/SULP TRANSPORTER-RELATED 1 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g02401 Car-Chr4 40619092 40619730 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g02401 1 152 Inorganic Solute Cotransporters AT5G10180 54.605 8.93e-47 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02401 K17469 - gmx:100798723 198.749