Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02369 ATGTCAAGTAGTGAGGAGACTCATTGGTGTTATAGTTGCAGGAGGCCAGTTCATGTTCAATGGGGACGGCGATCTACGATTTGCTCCGAATGTGATGGGGAATTTGTTCAGCATCTTGATAATTTGATCCCTACTACCCCTGCTCATGATTTTGATGATTCGATCCCTACTAGCCCTGGTCGTGTTTATGATGAATTTATCCCTAATAGTCCTCCAGAATTCCAAGGAGAGAACAGTCCAGAATTCCATAGAGGGAACAGCAGCGATGAGGACGAAATCCCACCAAGGTTTTCTGGAGCAAGTATTAACTCAGCTGACTATTTTGATGGTCCCGGACTTGACGAACTGGTTGAACAGATTTCGGCTGATGATCGGCAAGGCCCCCCACCAGCATCACAGTCCGCTATAGCTGCAATTCCTTCGGTCAAGATCAAGAAAAAGCATATAAAATCAGATTCACGTTGTCCAATATGCCAAAATAAATTTAAGCTGGGGTCAGATGCAAGACAATTGCCATGTAAACATATCTTTCACGAAAAGTGTATTCTACCCTGGTTGGCTCAAAATAATACCTGTCCTACTTGCCGTCATGAATTGCCGCCGGAAGAATCGAGTATCGGTAGTAGTAGCTCGAATAATAGAAGCAGTGGAAGGAGAAGGAGAAATAATTTTTCCTTTTTGTGGCCTTTCCGCAATTCTGATTCTTGA 708 0.4364 MSSSEETHWCYSCRRPVHVQWGRRSTICSECDGEFVQHLDNLIPTTPAHDFDDSIPTSPGRVYDEFIPNSPPEFQGENSPEFHRGNSSDEDEIPPRFSGASINSADYFDGPGLDELVEQISADDRQGPPPASQSAIAAIPSVKIKKKHIKSDSRCPICQNKFKLGSDARQLPCKHIFHEKCILPWLAQNNTCPTCRHELPPEESSIGSSSSNNRSSGRRRRNNFSFLWPFRNSDS 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02369 235 Pfam zinc-ribbon 7 37 IPR039525 GO:0061630
Car04g02369 235 Pfam Ring finger domain 154 196 IPR001841 -
Car04g02369 235 SMART ring_2 155 195 IPR001841 -
Car04g02369 235 MobiDBLite consensus disorder prediction 203 220 - -
Car04g02369 235 MobiDBLite consensus disorder prediction 69 101 - -
Car04g02369 235 PANTHER OS03G0351800 PROTEIN 2 48 - -
Car04g02369 235 PANTHER OS03G0351800 PROTEIN 71 235 - -
Car04g02369 235 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 2 48 - -
Car04g02369 235 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 71 235 - -
Car04g02369 235 SUPERFAMILY RING/U-box 136 202 - -
Car04g02369 235 MobiDBLite consensus disorder prediction 198 220 - -
Car04g02369 235 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 118 202 IPR013083 -
Car04g02369 235 ProSiteProfiles Zinc finger RING-type profile. 155 196 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g02369 Car-Chr4 38269017 38270846 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g02369 97 203 C3H Transcription Factor Family AT5G01980 44.037 2.22e-28 110
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g02369 04 38269017 38270846 Car04g02369 04 38269017 38270846 ECH