Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02358 ATGGGGATGGCTACAGAGTCACAGTTCCATGTATTAGCAGTTGATGACAGCATCATAGATAGAAAGCTGATTGAGAAACTTCTCAGAACCTCTTCCTATCAAGTTACTACAGTTGATTCTGGTAGCAAGGCTTTGGAGTTTCTAGGCTTGCTTGGGAATGAACAAAACAGTCCAAATACAGAATTTGTTGAAGTGAATGTGAACCTTGTTATAACAGATTACTGTATGCCTGGCATGACAGGCTATGATTTGCTTAAGAAAATCAAGGAATCATCATCCTTAAGAAACATACCAGTGGTGATTATGTCATCTGAAAATGTGCCTTCAAGGATAAACAGATGCCTAGAGGAAGGAGCAGATGAATTTTTGTTGAAGCCAGTGAGATTGTCAGATTTGAATAGGCTTAGACCAAGAAGACCAATTTAA 426 0.3873 MGMATESQFHVLAVDDSIIDRKLIEKLLRTSSYQVTTVDSGSKALEFLGLLGNEQNSPNTEFVEVNVNLVITDYCMPGMTGYDLLKKIKESSSLRNIPVVIMSSENVPSRINRCLEEGADEFLLKPVRLSDLNRLRPRRPI 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02358 141 ProSiteProfiles Response regulatory domain profile. 10 140 IPR001789 GO:0000160
Car04g02358 141 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR9 3 138 - -
Car04g02358 141 CDD REC_typeA_ARR 11 135 - -
Car04g02358 141 Gene3D - 10 139 - -
Car04g02358 141 Pfam Response regulator receiver domain 11 132 IPR001789 GO:0000160
Car04g02358 141 PANTHER TWO-COMPONENT RESPONSE REGULATOR 3 138 IPR045279 GO:0009736
Car04g02358 141 SUPERFAMILY CheY-like 8 133 IPR011006 -
Car04g02358 141 SMART REC_2 9 136 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g02358 Car-Chr4 37919941 37921125 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g02358 1 138 Response Regulator Gene Family AT3G57040 73.103 1.75e-72 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Car04g02358 Response_reg 3.1e-22 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02358 K14492 - gmx:100814494 229.565