Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02356 ATGGCTAGTAACAACAAAGAGAACGAGAAGGAGAGAGACTTTGAGTTTATGTTTAACGAGGATGTCGAGGAAGATGGTGAACAACATGATATTGAAACTGTGAAGGTAGAGAGTGAAAATAGCAGtgatgatgataatgatgatgaGGGAAATCATACAGTTCAGCCTCAGTCTTTCACTTCCCAGCAATGGCCTCAGAGCTACAAAGAGACTACAGATTCTTACACAATTGCTACAGCTCCGAATTTCGGGTCAATTCTACGAGGACCAAGTTTTATTTATTCAAGTTTTAGCAATCGTTCGAAGAGTAGCTTAGACATAGATGGAAAGACTCCTTTTCTATCAAGTCCAGAAGCCACTACTCAATCAATATGGCGGAAGAAAGGTTCGATGCAAAACCTTGTTGGAGAAATGCCTATTGGTTATGGTTGCAGTTTAACTCAAACAATTTTTAATGCGATTAATGTGATGGCTGGAGTTGGTCTTCTGTCTACACCTTATACAGTGAAACAAGCTGGGTGGATGAGCATGGTGTTGATGGTTCTTTTTGCAGCTGTTTGTTGCTATACAGCAACTCTTATGAGACACTGCTTTGAAAGCAGAGAAGGAATTAGTAGCTACCCTGATATAGGAGAAGCTGCATTTGGTAGATATGGCCGTATTTTTGTATCAATCATTTTGTACACTGAATTATATTCATATTGTGTGGAATTCATCACCTTGGAAGGAGACAACCTCACTAGTCTGTTTCCTGGAACATCCTTAGATTTAGGTAGTCTTCATTTAGATTCCCCGCATTTGTTTGGAGTTCTGACTGCACTTGTTATTCTTCCTACTATCTGGTTGAAGGATCTCCGAATAATCTCGTATCTATCAGTTGGAGGGATTGCAGCAACGTTATTGATTATTATCAGTGTGTTCTTTGTGGGGACAAGTGTTGGGTTCCATCATACTGGTCAGGTGGTGAATTGGAATGGCATTCCATTTGCTATTGGTGTCTATGGTTTTTGCTTTGCAGGACATTCAGTTTTTCCAAATATATACCAGTCTATGGCTGATAAAAAACAATATACCAAAGCATTGATAACATGTTTTGTTTTGTGTATTTTGATATATGGAAGCGTTGCAGTCATGGGATTTCTATCGTTTGGCGATGGCACTTTGTCTCAGATAACATTGAATATGCCACCAGGTGCATTTGCTTCCAAAGTTGCATTGTGGACAACAGTTATCAACCCACTCACTAAATATGCTTTATTGATGAATCCACTGGCAAGGAGTCTAGAGGAATTGCTACCTGATAGAATTTCAAGTACTTATTGGTGTTTTATTCTTCTTAGAACAGCACTTGTTATATCTACAGTTTGTGCTGCTTTTCTTATTCCGTTTTTTGGACTTGTGATGGCTTTGATTGGTTCTCTCTTCAGTATGCTTGTGTCAGTAATAATGCCGAGTTTATGCTTTTTAAAAATTGTGGGGAAGAAAGCTACAAAGACACAGGTTACAATGAGCGTCATAATTGCTGCATTGGGAATCATTTGTGGACTCCTTGGGACATATTCCTCATTGTTGAATATTGCCAATAGTTACTAA 1593 0.3836 MASNNKENEKERDFEFMFNEDVEEDGEQHDIETVKVESENSSDDDNDDEGNHTVQPQSFTSQQWPQSYKETTDSYTIATAPNFGSILRGPSFIYSSFSNRSKSSLDIDGKTPFLSSPEATTQSIWRKKGSMQNLVGEMPIGYGCSLTQTIFNAINVMAGVGLLSTPYTVKQAGWMSMVLMVLFAAVCCYTATLMRHCFESREGISSYPDIGEAAFGRYGRIFVSIILYTELYSYCVEFITLEGDNLTSLFPGTSLDLGSLHLDSPHLFGVLTALVILPTIWLKDLRIISYLSVGGIAATLLIIISVFFVGTSVGFHHTGQVVNWNGIPFAIGVYGFCFAGHSVFPNIYQSMADKKQYTKALITCFVLCILIYGSVAVMGFLSFGDGTLSQITLNMPPGAFASKVALWTTVINPLTKYALLMNPLARSLEELLPDRISSTYWCFILLRTALVISTVCAAFLIPFFGLVMALIGSLFSMLVSVIMPSLCFLKIVGKKATKTQVTMSVIIAALGIICGLLGTYSSLLNIANSY 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02356 530 PANTHER OS05G0424000 PROTEIN-RELATED 36 528 - -
Car04g02356 530 MobiDBLite consensus disorder prediction 1 67 - -
Car04g02356 530 MobiDBLite consensus disorder prediction 52 67 - -
Car04g02356 530 Gene3D Amino acid/polyamine transporter I 143 529 - -
Car04g02356 530 PANTHER AMINO ACID TRANSPORTER AVT1A 36 528 - -
Car04g02356 530 MobiDBLite consensus disorder prediction 1 17 - -
Car04g02356 530 Pfam Transmembrane amino acid transporter protein 145 521 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g02356 Car-Chr4 37862529 37879377 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g02356 1 465 Amino Acid or Auxin Permease AAAP Family AT2G41190 62.733 0.0 606
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02356 K15015 - gmx:100816431 842.417
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g02356 04 37862529 37879377 Car04g02356 04 37862529 37879377 ECH
Car04g00975 04 9812790 9818183 Car04g02356 04 37862529 37879377 ECH