Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02338 ATGGGAATAGAGATTGTGGAGCCAAACAGTTGCATTAGGGGTTGCTGCACCAGTTCCTTTATTCCCCTTCATCTCCCTACTTCCTCTTACCAACTTCTCTCCCCTATTGCCCGAGGAGCTGAGAGTGTTGTTTATGAAGGCACACTCAATGGAGACAAGGTTGCTGTCAAGAAACCCATCTTGTCAATTTCTGAAGACATCAATAAGTTTCATAAAGAATTGCAAATGCTATGCAAGCTAGATCACCCGGCAATAGCAACACTTATTGCTGCCCATGCAAAACCACCCAATTATATGTTTTTCTTCAAGTTGTACGAATATGCCAATCTCGGACAGAAGTTACATGTCGAAGAATGGGTCCCGACTGTCAACGATGCACTTATGATAACAATGCAGTTAGCAAAGGCCTTGCAATATCTGCATAACATCGGTATTCTACATAGAGATGTGAAACCAGCAAATATTCTTCTTGACACAAATCTTTGTCCACACCTCACTGATTTTGGTTTGGCAGAATACAAGAGTGATATTAAGGGAGTTTCTCTTGAGAATTGGAAATCTTCTGGAAAACCTACTGGCGGTTTTCACAAAAAGAACATGGTTGGAACCCTTGTTTACATGGCACCTGAAATATTAAGAAAGGAGTTACACACAGAAAAGTCAGATGTATACAGTTTTGGGGTATCAATCAATGAACTCCTTACCGGTGTTGTGCCATATACTGATCTTCGTGCAGAAGCTCAGGCTCATACAGTACTTGAGATGAACTACACTGAGCAACAACTAACAGCAGCCGTTGTTTCTGATGGATTACGACCGGTCCTTGCTAGTGAGGAGTTGGGTATACCATCAAGATTAATATCATTGATAAAAAAGTGTTGGGATGCTAATCCTAAAAGCAGACCTTCCTTTGATGAGATTGTTATGGAACTTGATTTTATTATGGAACACAGGAAGATAAAGAAAGTGGAAGATATGCGTATTAGACCTTGTAACTTTCCTGTTGGCCAACTTGTGGACAAGACTTACCAGGCTTATCAAGAGAGTATTAGCTGGTCTGCTCAAGGTGAACTTTTGGCCAAGAATACCTCTAGTTCAACTGATTCTGGCTTCAGAACATGGTGTGAGTCTTACGAAGAGCCTTTGGCATACCATCCAATACTGTCTTGGGGATCTTATGCTACCTGTGGGAGAAGGGAGGCTATGGAGGACACACATTTCATTTTGCCTCATGTTTGCAATGAAAAGGACGCCTATGCTTTTGGCATCTTTGATGGCCACAGAGGCGCAGCAGCTGCTGAGTTTTCTTCTAGGGCGGTACCAGCAGTTTTGCAAACTTTAGGGTTTACTGGCAGTCCTGCTAATGCACTGGTGGAAGCATTCCTTAGGACAGATGCTGCCTTCAGAAAAGAGGTTGATTCGTATCGCAAATCCAACAGATGTATCCAGAAGGATTGGCATCCGGGCTGTACAGCAATTGCTTCTGTTGTAAGTGGGAACAAGCTATTTGTTGCTAACAGTGGTGATTGCCGGGCAATCTTGTGTCGTGCTGGTAATCCCATTGCTCTAAGTAAGGATCATGTTGCAAGCTGTCTTCAAGAGAGAGAGCGTGTCATTCGTGACGGTGGCCAAGTACATTGGCAAGTTGATACCTGGCGAGTTGGTCTTCCTGCGCTTCAGGTTTATTCAAATTGGTTGCTATAG 1704 0.4313 MGIEIVEPNSCIRGCCTSSFIPLHLPTSSYQLLSPIARGAESVVYEGTLNGDKVAVKKPILSISEDINKFHKELQMLCKLDHPAIATLIAAHAKPPNYMFFFKLYEYANLGQKLHVEEWVPTVNDALMITMQLAKALQYLHNIGILHRDVKPANILLDTNLCPHLTDFGLAEYKSDIKGVSLENWKSSGKPTGGFHKKNMVGTLVYMAPEILRKELHTEKSDVYSFGVSINELLTGVVPYTDLRAEAQAHTVLEMNYTEQQLTAAVVSDGLRPVLASEELGIPSRLISLIKKCWDANPKSRPSFDEIVMELDFIMEHRKIKKVEDMRIRPCNFPVGQLVDKTYQAYQESISWSAQGELLAKNTSSSTDSGFRTWCESYEEPLAYHPILSWGSYATCGRREAMEDTHFILPHVCNEKDAYAFGIFDGHRGAAAAEFSSRAVPAVLQTLGFTGSPANALVEAFLRTDAAFRKEVDSYRKSNRCIQKDWHPGCTAIASVVSGNKLFVANSGDCRAILCRAGNPIALSKDHVASCLQERERVIRDGGQVHWQVDTWRVGLPALQVYSNWLL 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02338 567 Gene3D - 382 563 IPR036457 -
Car04g02338 567 SUPERFAMILY PP2C-like 380 553 IPR036457 -
Car04g02338 567 SMART serkin_6 30 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g02338 567 Pfam Protein kinase domain 30 308 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g02338 567 ProSiteProfiles Protein kinase domain profile. 30 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g02338 567 SUPERFAMILY Protein kinase-like (PK-like) 19 331 IPR011009 -
Car04g02338 567 CDD PP2Cc 391 561 IPR001932 -
Car04g02338 567 ProSiteProfiles PPM-type phosphatase domain profile. 389 567 IPR001932 -
Car04g02338 567 Gene3D Transferase(Phosphotransferase) domain 1 17 331 - -
Car04g02338 567 PANTHER PROTEIN PHOSPHATASE 2C 1 560 IPR015655 GO:0004722|GO:0006470
Car04g02338 567 PANTHER - 1 560 - -
Car04g02338 567 ProSitePatterns Serine/Threonine protein kinases active-site signature. 145 157 IPR008271 GO:0004672|GO:0006468
Car04g02338 567 Pfam Protein phosphatase 2C 394 554 IPR001932 -
Car04g02338 567 SMART PP2C_4 379 567 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g02338 Car-Chr4 37206348 37216474 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g02338 99 561 PP2C-type Phosphatase Gene Family AT2G40860 60.730 0.0 601
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-3 Car04g02338 Pkinase 4.5e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02338 - - gmx:100785390 966.452