Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02330 ATGGCCAAGGGTGATGACTCTGTCATGAGAAAGCAGAACAAAAAGCTTAGAAAAAAACAAAACAGCAAGAATGACTCCTCCGCCGTCTCTGCTAAGATTGCCGCTGTTATCGCCGCCAAGAAGCGCCGTAAGGCCGGCAAACGCCGCATTTGCGAGGGAATGTGCTTTAGTTTACCTACTCCAGATGATCCATTCAATGATAGACACGGGAAAGCAGAATTCAAAAAAAAGGATCCTGAAAAGAAAACACCTTTCCAAAAAGAGAAGACAACTTCTGTTAAAGAGAAGACTGCACCCAGCAAGAAACTTACAGTTGGTGGAAGTATCTCACCGAAATCAAAACAACTAACACGAAATGAGGCTGTCGCTGTGAATCAGATGGCTGAACTTTGCTGTGATCAACAACAGCATGATGATGAAATTTCAGACTTCCCTTCCAAATTTGTTTTTTGGTGTCTGAGTGCAATTGAAAATGCACTCCGACATGGTGATGCCTACACTGATGGAGAGGGTAACTCTTTCTTTTTAAACTCGTGGGGATTAGAATTTTCAAAGTGTTTTTCTACTGGTAAAGATTTGATGGAGACCAGCGGAACATTTGCTACTACTGAGCAAATTGCATGGATGATTTCTGGGGCAGCTGATGATTTTGTTAGAAAAGAGAAACAAGGCATATCATTAGACTGTCCCTTTCTTTTGTTCCTTGTTCCTTCTGAAAAAAAAGCTGGCCAGGTTCGAACAGTATGCAAGCCTTTGAAATCTTTAGGAATACATACAGTGAGTATTCATCCTGGTGCTTCCTTAGATCATCAGATTCAAGGTCTGAAAAGTTGTGAGCCGGAATTTCTCATTGCTACTCCAGAGAGGCTCTTGGAGCTTGTTTCCATGAAGGCCATTGATATTTCTGGTGTCTCTATGCTGGTTATTGATGGCATTGATGCTATTTGTAGTGCTGGCCACGCTGATGCAATAAAATCCATCAAGAACGTTATTTCTGGCAATCCCCGGCTTGTGATTTTCAATGATAGCTTCAACCATACAGTTATCCCAGTGGTTCGGCATCTTCTGACAGGATCTATTTGTAGACTATCTCTTAATAATTCATTCGCCAGCCTAAGTTCATGCATTGTCCAGTCTGTTCAAGCGTGTACATCTGAAGAAGATAAAGTTCCTAAGAGCATTGAAATCCTGTGTCAATTTTGGAGCAGCCATACTCGTAGTTCAAACCTTCTATATATTTTAAGGAAGGATGTCAAGTGCCATAAATTGGTCAAGACTCTCAAATCCATGGGTTGTTGTTCCATGCCACTTGGTTCTGATGCAGTTAATATTAATGATAGTGTGGATTCAAACAGGAGATTGGTTTCGATGATTGATTTGGAGGATGTCGTTAAGGTGGATATTGGGATGTATGATATAATAGTGCTACCTAGTTTTGTACCCTCTATGGACACTTACGTTCATATTTTGACAAATATGGCCCGCCAAAGTGTCAATGGTGTTTTGTATGGTTTCTTAACAAAAAGAGATACAGAACTTGCTGGACCACTCATATCAATTCTTGAACAATGTGGGCAGGAAGTGCCTGACACCCTGCAAAATCTGCATCAGGAATCAAACATGTTGGAAGATTGA 1635 0.4098 MAKGDDSVMRKQNKKLRKKQNSKNDSSAVSAKIAAVIAAKKRRKAGKRRICEGMCFSLPTPDDPFNDRHGKAEFKKKDPEKKTPFQKEKTTSVKEKTAPSKKLTVGGSISPKSKQLTRNEAVAVNQMAELCCDQQQHDDEISDFPSKFVFWCLSAIENALRHGDAYTDGEGNSFFLNSWGLEFSKCFSTGKDLMETSGTFATTEQIAWMISGAADDFVRKEKQGISLDCPFLLFLVPSEKKAGQVRTVCKPLKSLGIHTVSIHPGASLDHQIQGLKSCEPEFLIATPERLLELVSMKAIDISGVSMLVIDGIDAICSAGHADAIKSIKNVISGNPRLVIFNDSFNHTVIPVVRHLLTGSICRLSLNNSFASLSSCIVQSVQACTSEEDKVPKSIEILCQFWSSHTRSSNLLYILRKDVKCHKLVKTLKSMGCCSMPLGSDAVNINDSVDSNRRLVSMIDLEDVVKVDIGMYDIIVLPSFVPSMDTYVHILTNMARQSVNGVLYGFLTKRDTELAGPLISILEQCGQEVPDTLQNLHQESNMLED 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02330 544 MobiDBLite consensus disorder prediction 55 116 - -
Car04g02330 544 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 226 357 IPR027417 -
Car04g02330 544 MobiDBLite consensus disorder prediction 64 96 - -
Car04g02330 544 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 1 543 - -
Car04g02330 544 Gene3D - 221 367 IPR027417 -
Car04g02330 544 MobiDBLite consensus disorder prediction 1 31 - -
Car04g02330 544 Pfam DEAD/DEAH box helicase 205 331 IPR011545 GO:0003676|GO:0005524
Car04g02330 544 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 ISOFORM X1 1 543 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g02330 233 535 Eukaryotic Initiation Factors Gene Family AT1G72730 18.850 4.71e-07 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02330 - - gmx:100809099 710.679