Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02303 ATGATGTTTGTGCTGGTTTTGTATAGGTACGAGCTCGGTCGTCAGCTAGCAGACACTAAATTATCAAGCAACAAGACAATCAGAAGGATCCGTGTTCGAGGGGGTAATGTGAAGTGGAGAGAACTTAGATTGGATACCGGTAACTTCTCATGGGGAAGTGAAGCAGTAACTCGCAAGACTCGTCTTCTGGATATGAAACATCACTATGGTGTTGAAATTGGTAGAAAAAAGAAATCAGCTGCAACCAAGAAGGATTCTGCAGAGATGATAGTTTTGGAAACTTTCTTGTTATACACACTTATATACATTGTCCCATGTAGTTGGCTCTTCTTTCAAATCGGATGTCTTTTTTCTCAAGATCGTCAGCTAGATTCCCACATTGAAGAGCAGTTTGGTGGTGGTCGTTTGTTGGCCTGTATTTCATCTCGTCCAGGTCAATGTGGCAGGATTCATGGATACATCCTCGAAGGTAAGGAACTGAAATTTTCCATGAAGAAGTTACAGAGGAAGAAGGGAAATGGGAAGTCGTATTGCTATAAGGAAACAACAAATACCCAATCCGTTTGCACGATTGTAGGTGACTCTACCCTTTCTATCTTGCAAGAGAATTTGTGA 615 0.4146 MMFVLVLYRYELGRQLADTKLSSNKTIRRIRVRGGNVKWRELRLDTGNFSWGSEAVTRKTRLLDMKHHYGVEIGRKKKSAATKKDSAEMIVLETFLLYTLIYIVPCSWLFFQIGCLFSQDRQLDSHIEEQFGGGRLLACISSRPGQCGRIHGYILEGKELKFSMKKLQRKKGNGKSYCYKETTNTQSVCTIVGDSTLSILQENL 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02303 204 PANTHER 40S RIBOSOMAL PROTEIN S8 9 65 - -
Car04g02303 204 Pfam Ribosomal protein S8e 10 155 IPR022309 -
Car04g02303 204 CDD Ribosomal_S8e_like 9 155 - -
Car04g02303 204 PANTHER 40S RIBOSOMAL PROTEIN S8 119 175 - -
Car04g02303 204 PANTHER 40S RIBOSOMAL PROTEIN S8 119 175 IPR001047 GO:0003735|GO:0005840|GO:0006412
Car04g02303 204 PANTHER 40S RIBOSOMAL PROTEIN S8 9 65 IPR001047 GO:0003735|GO:0005840|GO:0006412
Car04g02303 204 Gene3D - 12 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g02303 Car-Chr4 34768708 34772318 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g02303 9 164 Cytoplasmic Ribosomal Protein Gene Family AT5G59240 52.128 2.54e-56 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02303 K02995 - fve:105349306 196.052