Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02290 ATGGCAAAGAGGAAAAGCTGGTTTGGATGGGTGAAAAGTCTATTCATTTCTCAGTCAAAGGACAAAAAGCAAAAGAAATGGGTATGGAGAATTGGAAGGATAAAACAGAAGCAATACCCAACAATTACAGCAGCTTCAAACAGAACATTGATTGAAGCAAGTGCAGAACAGAGAAAGCATGCTTTGGTTGTGGCTATTGCAACAACAgctgctgcagaggctgcaattgctgctgcacatgctgctgctgAGGTTGTCAAGCTTACAGGTGCATCTCGTTCTTATTCATTTCTCTCCAAGGGAGACAGAAGTTTGGCTGCTATCAAGATTCAAAGCGCATACCGTGCACATCTTGCTAGGAAAGCACTGAGAGCATTGAAGGGAGTTATAAGATTGCAGGCCATAATCCGCGGTGAAGCTGTTAGGCGTCAAGTGTCGAAAACTTTGAACAATGTTCCCTCAAATGCAAAAAGTCAGGAAGAAATTCAAGAAAGAAGCAGTCATAATGAGGAAGATTACAAAAATGACCAGATAAAACAGTTTCaaaagcaaaagaaaaagacagaagagaaggaaCTTAAGCCGGAATGCCATAGTCAAAGAAGTTGGAATTGTAGCTCACACTCAAGAGAAGACATTGAAGCCATTTGGTTAAGAAAGCAAGATGCTATTGTCAAAAGAGACCGCATGAGGCAATACTCTTCTTCACAAAAGGAGAGAAAATTTTCCCAAATGATGGAAGAATATGTGCACAACAAGGAACTTGGAGGAGATAGCTGTCGTACTCTAGGAGAGTGGCTACATAAAGAAACATGTGATTGGGATCATCCTTCAAATATCACCATAAGAAATGAAGTGCAAGAAGGATTAGGTTCACAAATTTCAGTCCAAAGAAAATCATTTTCTCATGTAAAAAGAAGTTCAGTTGGGGATGAGAGTTCCTTGCAAAATTCTCCTGTTTTTCCTAAATACATGGCTGTGACTGAATCTAGCAAAGCAAAGGTAAGGTCTTTGAGCACACCAAGGCTAAGAGCATGA 1038 0.3699 MAKRKSWFGWVKSLFISQSKDKKQKKWVWRIGRIKQKQYPTITAASNRTLIEASAEQRKHALVVAIATTAAAEAAIAAAHAAAEVVKLTGASRSYSFLSKGDRSLAAIKIQSAYRAHLARKALRALKGVIRLQAIIRGEAVRRQVSKTLNNVPSNAKSQEEIQERSSHNEEDYKNDQIKQFQKQKKKTEEKELKPECHSQRSWNCSSHSREDIEAIWLRKQDAIVKRDRMRQYSSSQKERKFSQMMEEYVHNKELGGDSCRTLGEWLHKETCDWDHPSNITIRNEVQEGLGSQISVQRKSFSHVKRSSVGDESSLQNSPVFPKYMAVTESSKAKVRSLSTPRLRA 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02290 345 MobiDBLite consensus disorder prediction 302 321 - -
Car04g02290 345 Pfam IQ calmodulin-binding motif 106 124 IPR000048 GO:0005515
Car04g02290 345 SMART iq_5 102 124 IPR000048 GO:0005515
Car04g02290 345 Pfam Protein of unknown function (DUF4005) 306 344 IPR025064 -
Car04g02290 345 MobiDBLite consensus disorder prediction 161 195 - -
Car04g02290 345 Gene3D - 102 151 - -
Car04g02290 345 ProSiteProfiles IQ motif profile. 127 154 IPR000048 GO:0005515
Car04g02290 345 PANTHER IQ-DOMAIN 5-RELATED 1 344 - -
Car04g02290 345 MobiDBLite consensus disorder prediction 150 195 - -
Car04g02290 345 ProSiteProfiles IQ motif profile. 103 131 IPR000048 GO:0005515
Car04g02290 345 PANTHER IQ-DOMAIN 12 1 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g02290 Car-Chr4 34186526 34190422 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g02290 1 345 IQD Protein Family AT5G03960 44.595 1.17e-67 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02290 - - cam:101513369 617.076
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g02290 04 34186526 34190422 Car04g02290 04 34186526 34190422 ECH