Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02237 ATGGGAAATTGTTGTACGACTCCATCCGTTATTACGAACAAGAAACAAAAGGAAAAGCCCAGAAAGGATGGGCCGaagaacaacaagaagcacaacaacaaaaacaaaaaACTGGTAGTATTAAAGGAGCCCACGGGCCGAGAGATTGGGCTTAAATATGATTTAGGGAGGGAACTAGGGAGAGGAGAATTTGGAATAACGTATCTATGCAAAGACAAAGAAACGGGAGAGGAATTAGCGTGCAAGTCGATTTCGAAGAGTAAACTTAGAACAACGATTGATATTGAAGATGTTAGAAGAGAGGTTGCGATTATGAGACACATGCCTAAGCATCCCAACATTGTGTCGTTGAAGGATACGTATGAAGACGACGATGCCGTTCATCTTGTTATGGAACTTTGTGAAGGTGGTGAGCTTTTTGATCGGATTGTTGCAAAAGGACATTATACCGAACGCGCCGCTGCTTCCGTCGTTAAAACCACCGTTCAAGTTGTTCAGATATGCCACAAACATGGAGTTATACATCGGGATCTCAAACCCGAGAACTTTTTGTTTGCAGACAAGAAGGAAACATCACCCTTGAAAGCTATTGACTTTGGTTTGTCAATTTTCTTTAAACCAGGTGATAAATTTAATGAGATAGTTGGAAGTCCATATTACATGGCCCCTGAAGTATTAAAGAGAAATTATGGCCCTGAAGTTGATATATGGAGTGCTGGAGTAATTCTTTACATCTTACTTTGTGGTGTTCCTCCCTTTTGGGCAGAAACTGAGCAAGGAGTTGCTCAAGCAATTATACGATCTGTTATTGACTTTAAAAGGGAGCCATGGCCAAACGTATCTGATAATGCAAAAGACCTTGTTAAGAAGATGCTTGATCCGGACCCAAAGCGCCGGCTTACTGCTCAGGAAGTGTTAGATCATCCATGGTTACAGAATGCAAAGACAGCCCCTAATGTTTCATTAGGAGAAACCGTCAGAGCAAGGCTCATGCAATTTTCTGTAATGAACAAACTTAAGAAAACAGCATTGAGGGTTATTGCAGACCATTTGTCTATAGAAGAAGTGGCTGGAATAAAAGAGGGATTCCAGCTGATGGATACAGAAAACAAAGGCAAAATTGACATTGACGAACTACGAGTAGGGTTGCATAAACTAGGCCACCAAATTCCTGATGGAGACGTCCAAATACTTATGGAAGCTGGTGATGTAGACAAAGATGGTTACCTAGATTATGGAGAGTTTGTAGCCATATCTATTCATCTTAGAAAGATATCACATGACGAACACCTTCTCAGAGCTTTCCAATTTTTTGATAAAAATCAATCCGGGTTTATTGAACTTGAGGAGTTACGTAATGCCTTAGCTGATGAGGTTGACACAAACAGTGAAGAAGTCATTAATGCAATTATGCATGATGTGGACACAAATAAGGATGGAAGCATAAGTTATGAGGAATTTGCTGCAATGATGAAGGCTGGAACAGATTGGAGAAAAGCATCAAGACAATTTTCACGAGAGAGGTTTACCAATCTAAGTCTGAAACTGATGAAGGAGGGGTCATTAGCAGTGAAAAATGAGGGTAGATGA 1590 0.3981 MGNCCTTPSVITNKKQKEKPRKDGPKNNKKHNNKNKKLVVLKEPTGREIGLKYDLGRELGRGEFGITYLCKDKETGEELACKSISKSKLRTTIDIEDVRREVAIMRHMPKHPNIVSLKDTYEDDDAVHLVMELCEGGELFDRIVAKGHYTERAAASVVKTTVQVVQICHKHGVIHRDLKPENFLFADKKETSPLKAIDFGLSIFFKPGDKFNEIVGSPYYMAPEVLKRNYGPEVDIWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKREPWPNVSDNAKDLVKKMLDPDPKRRLTAQEVLDHPWLQNAKTAPNVSLGETVRARLMQFSVMNKLKKTALRVIADHLSIEEVAGIKEGFQLMDTENKGKIDIDELRVGLHKLGHQIPDGDVQILMEAGDVDKDGYLDYGEFVAISIHLRKISHDEHLLRAFQFFDKNQSGFIELEELRNALADEVDTNSEEVINAIMHDVDTNKDGSISYEEFAAMMKAGTDWRKASRQFSRERFTNLSLKLMKEGSLAVKNEGR 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02237 529 ProSitePatterns EF-hand calcium-binding domain. 403 415 IPR018247 -
Car04g02237 529 Pfam Protein kinase domain 53 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g02237 529 MobiDBLite consensus disorder prediction 1 37 - -
Car04g02237 529 ProSitePatterns Serine/Threonine protein kinases active-site signature. 173 185 IPR008271 GO:0004672|GO:0006468
Car04g02237 529 SMART serkin_6 53 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g02237 529 ProSiteProfiles EF-hand calcium-binding domain profile. 354 389 IPR002048 GO:0005509
Car04g02237 529 Gene3D Phosphorylase Kinase; domain 1 55 138 - -
Car04g02237 529 SMART efh_1 394 422 IPR002048 GO:0005509
Car04g02237 529 SMART efh_1 466 494 IPR002048 GO:0005509
Car04g02237 529 SMART efh_1 430 458 IPR002048 GO:0005509
Car04g02237 529 SMART efh_1 358 386 IPR002048 GO:0005509
Car04g02237 529 PANTHER SERINE/THREONINE-PROTEIN KINASE 11 508 - -
Car04g02237 529 Gene3D - 320 494 - -
Car04g02237 529 CDD EFh 430 492 IPR002048 GO:0005509
Car04g02237 529 ProSitePatterns EF-hand calcium-binding domain. 439 451 IPR018247 -
Car04g02237 529 ProSiteProfiles EF-hand calcium-binding domain profile. 462 497 IPR002048 GO:0005509
Car04g02237 529 Pfam EF-hand domain pair 429 492 IPR002048 GO:0005509
Car04g02237 529 ProSitePatterns Protein kinases ATP-binding region signature. 59 82 IPR017441 GO:0005524
Car04g02237 529 ProSiteProfiles Protein kinase domain profile. 53 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g02237 529 SUPERFAMILY Protein kinase-like (PK-like) 52 321 IPR011009 -
Car04g02237 529 ProSiteProfiles EF-hand calcium-binding domain profile. 426 461 IPR002048 GO:0005509
Car04g02237 529 SUPERFAMILY EF-hand 335 504 IPR011992 -
Car04g02237 529 CDD STKc_CAMK 52 310 - -
Car04g02237 529 ProSitePatterns EF-hand calcium-binding domain. 475 487 IPR018247 -
Car04g02237 529 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 32-LIKE 11 508 - -
Car04g02237 529 Pfam EF-hand domain pair 371 417 IPR002048 GO:0005509
Car04g02237 529 Gene3D Transferase(Phosphotransferase) domain 1 139 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g02237 Car-Chr4 32071593 32077935 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g02237 1 527 EF-hand Containing Proteins AT5G19450 75.376 0.0 851
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Car04g02237 Pkinase 6.1e-78 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02237 K13412 - gmx:100815320 893.264
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02116 03 67396403 67400933 Car04g02237 04 32071593 32077935 PCT