Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02232 ATGTCTGCGCTGGTTTTGTATAGGTATGAGCTCGGTCGTCAGCCAACAAACACTAAATTATCAATTAACAAGACAATCAGAAGGATCCGTGTTCAAGGGAGTACTGTGAAGTGGAAAACACTTAGATTGAATACCGGTAACTTCTCATGGGGTAGTGAAGTAGTAACTCGCAAGACTCGTCTTCTGGATGTGGTTTACAATCCCTTAAATAACGAGCTTGTCCGAACGCATACTCTTGTTAAGAGTGCTATTGTTCAGGTGGATGATGCACCATTCAGGCAATGGTACCTTCAGCACTATGGTGTTGAAATTGGTAGAAAAAAGAAATCAGCTGCATAG 339 0.4189 MSALVLYRYELGRQPTNTKLSINKTIRRIRVQGSTVKWKTLRLNTGNFSWGSEVVTRKTRLLDVVYNPLNNELVRTHTLVKSAIVQVDDAPFRQWYLQHYGVEIGRKKKSAA 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02232 112 Gene3D - 15 109 - -
Car04g02232 112 PANTHER 40S RIBOSOMAL PROTEIN S8 8 110 IPR001047 GO:0003735|GO:0005840|GO:0006412
Car04g02232 112 CDD Ribosomal_S8e_like 8 106 - -
Car04g02232 112 Pfam Ribosomal protein S8e 9 92 IPR022309 -
Car04g02232 112 TIGRFAM eS8: ribosomal protein eS8 8 88 IPR001047 GO:0003735|GO:0005840|GO:0006412
Car04g02232 112 PANTHER 40S RIBOSOMAL PROTEIN S8 8 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g02232 Car-Chr4 31881661 31881999 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g02232 8 112 Cytoplasmic Ribosomal Protein Gene Family AT5G59240 79.048 1.24e-58 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02232 K02995 - qsu:112022593 182.956