Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02231 ATGGCAGAATCACTTCTCTTCAGTCTCGCCGAGTCCTTCATCGGAAAACTTGGTTCTCATGTTATTGAAGAAGCTTCTCTTGCACTTGGCGTCTACGACAATCTACGAGAGATAAAAACCACTGTTTCCCTCATCAAAGCTGTGTTGCTAGATGCCGAGCAAAAGCAGCGGCAGAATCATGAGCTGAAGGAATGGCTTAGACAGATCAAGCGTGTCTTCTCTGATGCAGAAGATATTATCGACGATTTCGAATGTGAGGCTTTGCGGAAGCACGTCGTCAACACTTCAGGTAGCATCAAAAGGAAGGTACGACGCTTCTTCTCGAGTTCTAATTCTCTTGTTTATCGCCTTAGAATGGCTCATCAAATCAAACATACTCAAGAGAGATTCAATAAGGTTGCTGCTGATAGGCATAACTTTGGCCTTCAAATCAACGAAACTGATAATCGTGTTGTTCAAACACGCGAAATGACTTATTCCCATGTAAATGATTCAAATGTGATAGGAAGGGAACTTGATAAACAAAAAATCATTGACCTCTTAATGAAAGATGCTAGTGATAAAAGTCTCTCTGTTATTCCTATTGTGGGAATTGGAGGATTGGGAAAGACTACACTTGCAAAATGTGTGTTCAATGATAAGAGTGTAGTTGAGTCTTTTCCATTGAAGATGTGGGTCTGTGTCTCTGATGATTTTACACTTAAGCATGTACTTCTTAAAATTCTCAATTCAGCTACTGATACTGATCCTAACCCAATTCTCCAAGACAGCTTTAAAGATTTTGATACGGAGCAACTACAAATTCATATCAGAAACAAACTTAGTCAAAAGTTCTTGCTCGTCTTGGACGATGTATGGAATGAGGATCGTGCCAAATGGGAGGAGTTGAAAGATATAATACAAGTAGATGTAGGTGCTCAAGAGAGTAAAATCATAGTGACGACACGCAGCCACACAATAGCCAACATGATGGGCACTTGCTCCTCTTACATTTTGCAAGGGCTTTCTAGGGAGGATTCCTTGTCTGTATTTGTCAAATGGGCCTTTAGAGAAGGAGAAGAGAAAAATTATCCTGAGTTGATCGAGATTGGTGAAGAAATTGTGCAAAAATGTGGAGGGCTTCCTTTGGCCCTAAGAACATTGGGGAGTTCTCTATTTTTAAAATCTGATATTGATGATTGGAAGTTTGTTAAGGACAATGAAATTTGGAATTTACCACAAAAAAAGGATGATATATTGCCTGCTATCAAATTAAGTTATGATCAGTTACCTTCCTATTTGAAAAGATGTTTTGCTTGTTTCTCCCTTTTTCGAAAAGACATTCAATTTTATAGTTTTAATGTTACTGCATTATGGGAGGCACTTGGCTTCCTTCCATCACCAAAGAAGGATAAATCAGTAGAAGAAATTGGCTATCAAATTTTGCGTGAGCTACAGTCCATATCTTTTCTCCAAGATTTTGTTGATTATGGCAATTCTTGCGCCTTCAAGTTACATGATTTAGTGCATGATCTCTCATTGTATGTTGCAGTAGATGAGTTTCAAACGTTGAAGTTTCGTAGTGAAAGTGTTTTTGAGAACGTCCTCTATTTGTCATTTAATAAAAATAATAATGATTTGCTTGGTCAAATACCGATCCCTACTAGACTGAGAAGCATACTCTTTCCTCGAGGAGCCAACAATGAAGCTTTCTTGAATACTTTGTTATCAAGGTGTAAATTCTTACGGGTTTTGCAAATAAATTATTCAACATATAAGAGTTTGCCTTCCTCCATTGGCAAATTAAAACATTTAAGATATCTCAATCTTCAGGATAATAAAGCACTAAAGAGCCTCCCTGATGTAGTGTGCAAACTCCAAAATTTGTTAACTTTGAATTTCCAAAGGTGCAAAAAGCTTCGATTATTACCTAATGGAATAGGAAAGTTGATCAGCCTTCGCCGACTGCAGATAACCACAAAGCAAACCAATATCCCAAACAACGAGATAGCAAAACTGACTTCTTTAGAAATTTTCTCTGTCGTTAGTTGTCGCAATTTGGAGGAGTTGTTGGAAGGAATTCAACTTCCTAATCTTAGATCGTTGCTAATT 2091 0.3783 MAESLLFSLAESFIGKLGSHVIEEASLALGVYDNLREIKTTVSLIKAVLLDAEQKQRQNHELKEWLRQIKRVFSDAEDIIDDFECEALRKHVVNTSGSIKRKVRRFFSSSNSLVYRLRMAHQIKHTQERFNKVAADRHNFGLQINETDNRVVQTREMTYSHVNDSNVIGRELDKQKIIDLLMKDASDKSLSVIPIVGIGGLGKTTLAKCVFNDKSVVESFPLKMWVCVSDDFTLKHVLLKILNSATDTDPNPILQDSFKDFDTEQLQIHIRNKLSQKFLLVLDDVWNEDRAKWEELKDIIQVDVGAQESKIIVTTRSHTIANMMGTCSSYILQGLSREDSLSVFVKWAFREGEEKNYPELIEIGEEIVQKCGGLPLALRTLGSSLFLKSDIDDWKFVKDNEIWNLPQKKDDILPAIKLSYDQLPSYLKRCFACFSLFRKDIQFYSFNVTALWEALGFLPSPKKDKSVEEIGYQILRELQSISFLQDFVDYGNSCAFKLHDLVHDLSLYVAVDEFQTLKFRSESVFENVLYLSFNKNNNDLLGQIPIPTRLRSILFPRGANNEAFLNTLLSRCKFLRVLQINYSTYKSLPSSIGKLKHLRYLNLQDNKALKSLPDVVCKLQNLLTLNFQRCKKLRLLPNGIGKLISLRRLQITTKQTNIPNNEIAKLTSLEIFSVVSCRNLEELLEGIQLPNLRSLLI 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02231 697 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 149 433 IPR027417 -
Car04g02231 697 CDD RX-CC_like 12 124 IPR038005 -
Car04g02231 697 Pfam Rx N-terminal domain 11 100 IPR041118 -
Car04g02231 697 Gene3D - 148 331 IPR027417 -
Car04g02231 697 Gene3D - 10 124 - -
Car04g02231 697 PRINTS Disease resistance protein signature 593 609 - -
Car04g02231 697 PRINTS Disease resistance protein signature 192 207 - -
Car04g02231 697 PRINTS Disease resistance protein signature 272 286 - -
Car04g02231 697 PRINTS Disease resistance protein signature 371 385 - -
Car04g02231 697 Gene3D - 334 424 IPR042197 -
Car04g02231 697 PANTHER OS08G0543100 PROTEIN 27 692 - -
Car04g02231 697 Gene3D Ribonuclease Inhibitor 512 696 IPR032675 -
Car04g02231 697 Pfam NB-ARC domain 171 421 IPR002182 GO:0043531
Car04g02231 697 SUPERFAMILY L domain-like 497 695 - -
Car04g02231 697 PANTHER DISEASE RESISTANCE PROTEIN RP 27 692 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g02231 Car-Chr4 31831913 31834091 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g02231 190 693 WRKY Transcription Factor Family AT5G45050 23.719 1.92e-08 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02231 - - mtr:MTR_7g078640 914.835