Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02228 ATGGCAGAATCACTTCTCTTCGGTCTCGCTGAGTCATTCATCGGTAAGATTGCTTCTCGTGCTGTTGAAGAAGCTTCTCTTGCGCTTGGCGTCTATGACGATATGCAAGAGATAAAAAACACCGTCACCCTAATCAAAGCTGTGTTGTTGGATGCTGAGCAAAAGGAGAGGCAAAATCAGGAGCTGCGTGTATGGTTGCGACAGATCAAACGCGTCGTCTCCGATGCTGAAGATGTAGTTGATGATTTTGAATGTGAGGCATTGCGGAAGCACGTGGTCAACTCTTCAGGTAGCATTAGAAGAAAGGTACGGCGTATTTTCTCAAGTTCTAATCCTCTTGTTTATCGTCTTAGAATGGCGCATCAAATCAAAAATGTTAGAGATAGATTAGATAAGGTTGCTGCTGATAGGCTTAAGTTTGGTCTTCAAATCAATCACAACGACAATCGTGTTGTAGAAACGCGAGAATTGACTCATTCCAACGTAATTGATTCGGATGTGATAGGAAGGGAACCTGATAAACAAAAAATCATTGACCTCTTATTGCAAAATGATGGTGATAAAAGTCTCTCTGTGATTCCTATTGTGGGAATTGGAGGATTGGGAAAGACTACACTTGCAAAATGTGTGTTCAATGATAAGAGTGTAGTTGAGTCTTTTCCATTGAAGATGTGGGTCTGTGTCTCTGATGATTTTGAACTTAAGCATCTACTTGTTAAAATCCTCAATTCTGCTAGTGTGTCAAATAATAACCCAATTCACCATGAGAACTTTAAAATCTTTGATGTTGAGCAATTACAAAATCATATAAAAAATGCACTTGCTGGTCATAAGTTCTTGCTCGTCTTGGATGACGTATGGAACGAGGATCGTGTCAAATGGGAAGAATTGAAAGATATAATACAAGTAATTGTAGGTTCTCAAGGGAGTAAAGTCGTGGTGACTACACGGAGCCACATAGTAGCCGACGTGATGGGAACTCATTCTTCTCACTTTTTGCAAGGTCTATCAGGAGACGATTCCTTGTCTGCATTTGTGAAATGGGCTTTTAAAGTGGGAGAAGGAGAAAATTATCCAGAGTTGATGGAGATTGGGAAAGAAATTGTGCAAAAATGTGGAGGGCTTCCTTTGGCCCTAAGAACATTGGGGAGTTCATTGTTCTTGAAATTTGATATAGATGATTGGAAGTTTGTTAGGGACAATGAGATTTGGAATTTATCACAAAAAAAGGATGATATATTGCCTGCTATAAAATTAAGTTATGATCGGTTACCTTCTTATTTAAAACGATGCTTTGCTTGCTTCTCCCTCTTTGTAAAGGGCTACCAGTTGGATAGTCTTAGTGTTACTGCGATATGGGAGGCACTTGGTTTTCTTCCATCACCAAAGAAAGGTAAAGGCGTAGCAGATGTTGGCAATCAAATTTTGCATGAGTTACGGTCAAGATCTTTTCTTCAAGATTTTGTTGATTATGGCAATGGTTGCGAGTTTAAGTTGCATGATTTAGTGCATGATCTTGCATTATATGTTGCAGGAGATGAGTTTCAATTGTTGAAGTTTCGTAGTGAAAGTATTTTTGAGGATGTCCTCCATTTGTCATTAATTACAAATAATGATGATTTGTTTGGTCTAACACAAATTCCCACTAGACTGAGAAGCATTATTTTTCCTTCAGGAGCCAACAATGAAACTTTCTTGAATACTATGTTATCAAGGTGTAAATTCTTACGGATTTTGACGTTAGCAAATTCTAGATATGAGAGTTTGCCCCGCTCCATTGGCAAATTAAAACATTTAAGATATCTCAATCTTGAGAATAATATAGAACTGGAGAGCCTCCCAGATGCATTGTGCAAACTCCAGAATCTACACACTTTGAAACTCAATGGATGCATAAACCTTAAAAGATTACCCAATGAAATTGGAAACTTGATCAGCCTTCGACAATTACACATAACCACAAAACAATCTAACTTTCCAAACAAAGAGATTGCAAAGTTAACTTCCTTAGAAATTTTATCTGTCCGTCATTGTGACAATTTGGACTTGTTGTTTGAAGGAATACAACTTCCTAATCTTAAATTTTTGGATATTGCATATTGTGAGAATCTAAGGTCCTTGCCGCATCATGTTGTTCTGAACTTAGAAGGTTTGTTGATAACTGAGTGTAATAAGATGAAATTGTCATTGGACCATGATAGCTACATTCCTAATTTAAGGTTAAAGTTGCTATCTCTAGAATATTTGCCCCAGTTGGTGGTTTTACCTCAATGGTTGCAAGGATGTGCAAAAACATTACAAACCTTGGCACTTGAAAACTGTTACAATCTTCACGAGCTTCCTATGTGGCTGTCAACTTTCATTTCTCTCAAAACACTTTCATTGGAAAATTGTCCAAGATTGGTTTTGATCCCTAATGATGTGCACCACCTCAAAAACCTTGATTATGTGAAAATCAAAGGGTGTGTTGAATTATGTAAAAGTTACCATCCAAAAGATGGAATAAATTGGCACAAAATATCACACATCAAACAAGTTATAATATTACCAGAACTAGAAAATTAA 2565 0.3735 MAESLLFGLAESFIGKIASRAVEEASLALGVYDDMQEIKNTVTLIKAVLLDAEQKERQNQELRVWLRQIKRVVSDAEDVVDDFECEALRKHVVNSSGSIRRKVRRIFSSSNPLVYRLRMAHQIKNVRDRLDKVAADRLKFGLQINHNDNRVVETRELTHSNVIDSDVIGREPDKQKIIDLLLQNDGDKSLSVIPIVGIGGLGKTTLAKCVFNDKSVVESFPLKMWVCVSDDFELKHLLVKILNSASVSNNNPIHHENFKIFDVEQLQNHIKNALAGHKFLLVLDDVWNEDRVKWEELKDIIQVIVGSQGSKVVVTTRSHIVADVMGTHSSHFLQGLSGDDSLSAFVKWAFKVGEGENYPELMEIGKEIVQKCGGLPLALRTLGSSLFLKFDIDDWKFVRDNEIWNLSQKKDDILPAIKLSYDRLPSYLKRCFACFSLFVKGYQLDSLSVTAIWEALGFLPSPKKGKGVADVGNQILHELRSRSFLQDFVDYGNGCEFKLHDLVHDLALYVAGDEFQLLKFRSESIFEDVLHLSLITNNDDLFGLTQIPTRLRSIIFPSGANNETFLNTMLSRCKFLRILTLANSRYESLPRSIGKLKHLRYLNLENNIELESLPDALCKLQNLHTLKLNGCINLKRLPNEIGNLISLRQLHITTKQSNFPNKEIAKLTSLEILSVRHCDNLDLLFEGIQLPNLKFLDIAYCENLRSLPHHVVLNLEGLLITECNKMKLSLDHDSYIPNLRLKLLSLEYLPQLVVLPQWLQGCAKTLQTLALENCYNLHELPMWLSTFISLKTLSLENCPRLVLIPNDVHHLKNLDYVKIKGCVELCKSYHPKDGINWHKISHIKQVIILPELEN 854
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02228 854 PANTHER DISEASE RESISTANCE PROTEIN RP 24 807 IPR044974 GO:0006952
Car04g02228 854 Pfam Leucine rich repeat 576 631 IPR001611 GO:0005515
Car04g02228 854 Gene3D - 149 331 IPR027417 -
Car04g02228 854 Pfam NB-ARC domain 171 422 IPR002182 GO:0043531
Car04g02228 854 SUPERFAMILY L domain-like 498 840 - -
Car04g02228 854 Pfam Rx N-terminal domain 11 98 IPR041118 -
Car04g02228 854 CDD RX-CC_like 12 134 IPR038005 -
Car04g02228 854 Gene3D - 335 425 IPR042197 -
Car04g02228 854 Coils Coil 66 86 - -
Car04g02228 854 PANTHER OS08G0543100 PROTEIN 24 807 - -
Car04g02228 854 PRINTS Disease resistance protein signature 192 207 - -
Car04g02228 854 PRINTS Disease resistance protein signature 273 287 - -
Car04g02228 854 PRINTS Disease resistance protein signature 372 386 - -
Car04g02228 854 PRINTS Disease resistance protein signature 688 704 - -
Car04g02228 854 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 149 434 IPR027417 -
Car04g02228 854 Gene3D - 10 124 - -
Car04g02228 854 Gene3D Ribonuclease Inhibitor 527 687 IPR032675 -
Car04g02228 854 Gene3D Ribonuclease Inhibitor 688 832 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g02228 Car-Chr4 31755258 31757822 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g02228 190 825 WRKY Transcription Factor Family AT5G45050 23.582 4.10e-12 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02228 - - mtr:MTR_7g078640 1102.04