Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02223 ATGAATGAACTGCTTGCCAGTGATGGGCAAGAATTCTTCACCTCATATGATGAAGTCCATGACAACTTTGGTGCAATGGGGCTGCAAGAAAACCTTTTGCGAGGCATATATGCTTACGGTTTTGAGAGGCCTTCTGCAATCCAGCAAAGAGGAATTGTTCCTTTTTGCAAAGGTCTAGATGTGTTTCAACAGGCTCAGTCAGGAATAGGGAAGACAACAACATTTTGTTCTGGAATTTTGCAGCAGCTCAATTACAGATTGGTTCAGTGCCAGGTTTTGGTTTTGGCCCCTACGGGGGAGCTAGCTCAACAGATTGAGAAGGTTATGCGAGCTCTTGTCGATTTCCTTGGTGTTAAGGTTCATGCTTATGTTGGTGGGACAAGTGTTCGTGAGGATCAACGCATTCTCCCCGTTGCTTGTTTGTTATGA 429 0.4476 MNELLASDGQEFFTSYDEVHDNFGAMGLQENLLRGIYAYGFERPSAIQQRGIVPFCKGLDVFQQAQSGIGKTTTFCSGILQQLNYRLVQCQVLVLAPTGELAQQIEKVMRALVDFLGVKVHAYVGGTSVREDQRILPVACLL 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02223 142 Gene3D - 12 140 IPR027417 -
Car04g02223 142 PANTHER - 1 136 - -
Car04g02223 142 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 21 49 IPR014014 GO:0003724
Car04g02223 142 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 52 142 IPR014001 -
Car04g02223 142 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 1 136 - -
Car04g02223 142 Pfam DEAD/DEAH box helicase 46 134 IPR011545 GO:0003676|GO:0005524
Car04g02223 142 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 15 136 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g02223 Car-Chr4 31418010 31418438 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g02223 1 136 Eukaryotic Initiation Factors Gene Family AT3G13920 82.482 2.54e-75 228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02223 K03257 - cam:101510911 276.174