Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02206 ATGGAAGATTATGAAGTCATAGAGAAACTTGGAAGAGGAACTTTGGGTGCAACTTTTCTTGTTCTTCATAAAGCTGAAACAAAGAGGTATGTGCTGAAGAAGATTCGCTTGGCCAAACATTCAGAGAAGGCCAAATTGACAGCCTACCAAGAGATGGACCTGATAGCAAAACTAAATTACCCTTATATTGTGGAGTACAAAGATGCTTGGGTGGAGAAGGAGGACTATATATACATTATAAGCGGCTATTGCGAAGGAGGTGACATGGCCGAGAATATAAAGAAATCTCGAGGATTGTTTTTTCCAGAGGAGAAAGTGTGCAAATGGATGACTCAGTTGTTGCTAGCTGTGGATTACCTGCACTCTAACCGCGTCCTCCACAGAGATCTTAAGTGTTCCAACATATTCCTCACCAAAGAAAATAACATTCGTCTAGGTGACTTTGGTCTTGCAAAACTACTTAACACAGACGATCTTTCTTCTTCGGTTGTCGGAACTCTAAATTACATGTGTCCTGAGATCTTTGCTGATATGCCTTATGGTTATAAATCTGACATATGGTCGCTGGGTTGCTGCATGTTTGAAATCGTTGCACATCAACCAGCATTTCGCGCTCCAGACAGGGCTGGACTTATCAATAAAATAAACAGATCCACCATTTCTCCACTGCCAATTGTTTACTCTTCGACACTGAAACAACTTATCAAGAGCATGCTAAGGAAAAACCCTGAACACAGACCAACAGCGGCTGAATTGTTGAGACATCCTCATTTACAACCTTTTGTTCTCCGCTCTCGTAATGCATCGTCCGTTTTTCTTCCGGTACATCTCATAAGTTGTGACTCACCAAAAAAATCTTACAGATCTTGTGGTGGTGGCAACGACAATAGAAACAAAGATGAAGGATTAGTAAACCATTTTGAGCGGCGTGTTTATCCAATTGAGGGAAATGGAGATGTACAGACAAGAAACCGACCACATGATCGCAAGTTAGCACTGTCAACCAGCACAGAAGACAACCTCGAGACTAAAATGGTTGATCCTACCAGCTACACGTTGGAATTTTCTACTAGTATTAGTGGCTCAAAAGATGAGTCGACAACATCTGAATCAACTGTATGCAGTGTGTGCAAGGAAGCAGATTTCAAAAGTAGAGGTGTAAGAGACACGGCTGACGGTGAGATCACTTCAAAGAGAACACTAGTAGATTCTGTGCAAGAAAAACAAGTATTTGCTGTGAAACATTTTCAGAAGTTGTATTCAGTTGATATAAATGCAGTGAGTTCCAAAGATGAAGTTTTTGATAATGCTGAAGCACATAAGGATAAAGATGGAAAACCTGAGGACTCCGGTAAAACAATAACGTCGAGTGAAGACAACAGTGGCAATGACAGAGATGCGTCCACTGCAGATGAGGTCACATCAATTTGTGCTCGAGATTCTGTGCTTGTAGAACAAAGAATTACTGTTGAACATTTTCAGAAGGCTGATTCAGTCGACATAAATGCAGTAACTACAGAAGATAAATATCAATTTTCCGATAAAGCTGAAGCACATAGAGAAAACGCCAAACATGGGGACTTGATTAAATCGATAATGTCCAGTGAAGATAGAACTGACAATAGTATTGATGAGATCACTTCAGAAAGTACACTAGAGTTTTTGCTTGTAGAACAATTTATTACCGAACACTTTCAGAATCCTGATGCCTTTGACATAAATGCAGTGACAACAGAAATTGAAGGTACTTTTTCTGAAGGCGGTTTTGATACTTTTTCCGAAGTTGGTTTTGATACTTTTTCCGAACGTGATTTTGATAAGATCGAAGCACACCAAGGAGATGCCAAACCTGAGGATTCAAGTAAATCAATCATTTACAGCAAAGACTGCAGTGAAGACCAGTCCGTTGATGATATCACTTCAAAGAGCACACCGGATTTTCTACATGACGTACCAGAATTTGCTGCTGAGAATTTTCAGAAGTCAAATATAATCGATATAAATGCAGCAACTACAAAAGTTGATGATACTCTTTCTAGTAATAGTTTTGAAAAAGCTGAAGCACCGAGAGAAGGTGCCGAACCGGAGGACTCGTGTAAATTAATCATTGACAGCACTGACAAAGAAGGGTCTTTTGATGAGATCACATCAAAGAGCACACTGGATTCTGATCAAGAAGAACAGCGATTCGCTGCTGAACACTTTCAGAAACCAGATACAATTGACATAAATGCAGAGACTACGAAAGTTGACGGTATTTTTTCCAATGAAGATTTCGATAAAGCTGAAGCACAGAAAGGAGATGCCAACCTTGAGGACCCTAGTAACTCAATAGTTTCTAGTGAAGACAGAAGTGACAATGAGAAAGTTGGATTCATTGATGAGGAAATGGAATTACCAATTGTGCATACTGTGAAGGTTGAGCAAGACCCTGATTCCGTAAACTGCTTGAAGGAAAGTAAAAATCCTGAAGCATTCTCAGACGACTCACACATGAACATCGTGACGTCTGAGAGGAATGATACACACATAATCAGTTGTTTGACACATAAAGATGATAATAATTCCATTGTTGTTGATAAGACGCACAATGACATTTCCTTAAGTACACATATTTTAGTAGGAGGCGACAAACCGAAGAGGGTGTTGAATAATTCCGGCCAACAAAGAGCTGATGCTTTGGAGTCTCTACTTGAGTTATGTGCTCATTTACTTAAGCAAGGAAAGCTTGAAGAGCTTGCGGCTGTGTTAAGACCGTTTGGGGAAGACACTGTTTCGTCCAGAGAAACTGCTATATGGCTGACAAAAAGCCTAATGTCGTCGCAAAAATTTAATCCAGAAACCCCTAATTTGTGA 2856 0.3999 MEDYEVIEKLGRGTLGATFLVLHKAETKRYVLKKIRLAKHSEKAKLTAYQEMDLIAKLNYPYIVEYKDAWVEKEDYIYIISGYCEGGDMAENIKKSRGLFFPEEKVCKWMTQLLLAVDYLHSNRVLHRDLKCSNIFLTKENNIRLGDFGLAKLLNTDDLSSSVVGTLNYMCPEIFADMPYGYKSDIWSLGCCMFEIVAHQPAFRAPDRAGLINKINRSTISPLPIVYSSTLKQLIKSMLRKNPEHRPTAAELLRHPHLQPFVLRSRNASSVFLPVHLISCDSPKKSYRSCGGGNDNRNKDEGLVNHFERRVYPIEGNGDVQTRNRPHDRKLALSTSTEDNLETKMVDPTSYTLEFSTSISGSKDESTTSESTVCSVCKEADFKSRGVRDTADGEITSKRTLVDSVQEKQVFAVKHFQKLYSVDINAVSSKDEVFDNAEAHKDKDGKPEDSGKTITSSEDNSGNDRDASTADEVTSICARDSVLVEQRITVEHFQKADSVDINAVTTEDKYQFSDKAEAHRENAKHGDLIKSIMSSEDRTDNSIDEITSESTLEFLLVEQFITEHFQNPDAFDINAVTTEIEGTFSEGGFDTFSEVGFDTFSERDFDKIEAHQGDAKPEDSSKSIIYSKDCSEDQSVDDITSKSTPDFLHDVPEFAAENFQKSNIIDINAATTKVDDTLSSNSFEKAEAPREGAEPEDSCKLIIDSTDKEGSFDEITSKSTLDSDQEEQRFAAEHFQKPDTIDINAETTKVDGIFSNEDFDKAEAQKGDANLEDPSNSIVSSEDRSDNEKVGFIDEEMELPIVHTVKVEQDPDSVNCLKESKNPEAFSDDSHMNIVTSERNDTHIISCLTHKDDNNSIVVDKTHNDISLSTHILVGGDKPKRVLNNSGQQRADALESLLELCAHLLKQGKLEELAAVLRPFGEDTVSSRETAIWLTKSLMSSQKFNPETPNL 951
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02206 951 ProSitePatterns Serine/Threonine protein kinases active-site signature. 125 137 IPR008271 GO:0004672|GO:0006468
Car04g02206 951 ProSiteProfiles Protein kinase domain profile. 4 258 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g02206 951 SMART serkin_6 4 258 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g02206 951 CDD STKc_Nek 3 258 - -
Car04g02206 951 MobiDBLite consensus disorder prediction 438 471 - -
Car04g02206 951 MobiDBLite consensus disorder prediction 438 453 - -
Car04g02206 951 PANTHER SERINE/THREONINE-KINASE NEK7-LIKE PROTEIN 598 666 - -
Car04g02206 951 PANTHER SERINE/THREONINE-KINASE NEK7-LIKE PROTEIN 499 582 - -
Car04g02206 951 PANTHER SERINE/THREONINE-KINASE NEK7-LIKE PROTEIN 660 743 - -
Car04g02206 951 PANTHER SERINE/THREONINE-KINASE NEK7-LIKE PROTEIN 796 931 - -
Car04g02206 951 PANTHER SERINE/THREONINE-KINASE NEK7-LIKE PROTEIN 1 507 - -
Car04g02206 951 PANTHER SERINE/THREONINE-KINASE NEK7-LIKE PROTEIN 740 795 - -
Car04g02206 951 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 660 743 - -
Car04g02206 951 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 740 795 - -
Car04g02206 951 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 796 931 - -
Car04g02206 951 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 1 507 - -
Car04g02206 951 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 499 582 - -
Car04g02206 951 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 598 666 - -
Car04g02206 951 MobiDBLite consensus disorder prediction 454 470 - -
Car04g02206 951 Pfam Protein kinase domain 4 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g02206 951 MobiDBLite consensus disorder prediction 766 786 - -
Car04g02206 951 SUPERFAMILY Protein kinase-like (PK-like) 1 278 IPR011009 -
Car04g02206 951 Gene3D Phosphorylase Kinase; domain 1 1 83 - -
Car04g02206 951 Gene3D Transferase(Phosphotransferase) domain 1 84 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g02206 Car-Chr4 30877161 30884697 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g02206 4 259 MAP Kinase Kinase Kinase AT3G13530 31.907 1.40e-33 138
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Car04g02206 Pkinase 3.8e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02206 K08857 - gmx:100796658 975.311
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02132 03 67563845 67569751 Car04g02206 04 30877161 30884697 PCT