Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02205 ATGGGTAAGAAGAAGAGTAGGGTTTCCGTTTCCGACGACGACGATGAAGAAATGGATTCCGATATCAACGGTTCCAGTTCAAATCAAAACGAAAACACGCTCTACCAGGTTATTGGTGTGGAGAAAACAGCTTCTCAACAGGAAATAAAGAAGGCGTATTACAAATTGGCGTTGAGAGTTCATCCTGATAAGAACCCTGGTGATGAGGAAGCTAAAGCCAAATTTCAGCAATTGCAGAATGTTATCTCCATTCTTGGTGATGAAGAGAAACGGGCACTATATGATCAGACTGGTTCTGTCGATCATGTTGACCTTGGAGGCGATGTTGTGCAGAACCTTCGAGAATATTTCAGAACAATGTACAAGAAGGTCACAGAAGAAGATATTGAGGAGTTTGAGGCAAATTATAGAGGATCTGAATCTGAGAAAAATGATTTGATAAATCTTTACAAGGAATGCAAGGGTAATATGGACAGGTTATTTTGTTCAATGCTTTGTTCAGATCCTAAACTTGACTCGCACCGATTCAAGGATGTTATTGATGAGGCTATAGCCTCTGGAGAGCTAAAGGAAATGAAAGCCTACAAGAAATGGGCGAAAAAAATAGCAGAAACCAAGCCAGCAACCAGTCCTTTAAGAAGGAGGGAAAAATCAAATAAGGAACCAAAAATGGATTTGTATGCTATGATATCACAACGACGAGATGAGAGGAAAGGCAAGTTTGATTCTATGTTCTCGTCTCTAATATCAAAATATGGTGGAGGTCATGGGCCAGAACCTTCTGAAGAAGACTTTGAAGCTACGCAGAGAAAGATGGAAAGAAGAAGCCATGCCCAAAGACCTGTATTACGGTATCGTGCCCTTTACAAATTTGATTACAAGGCATATGTAGCTAGCTTCATTAGGCTGCCATGTAGATGTCACCAAAGTCACCAAATATGA 942 0.4045 MGKKKSRVSVSDDDDEEMDSDINGSSSNQNENTLYQVIGVEKTASQQEIKKAYYKLALRVHPDKNPGDEEAKAKFQQLQNVISILGDEEKRALYDQTGSVDHVDLGGDVVQNLREYFRTMYKKVTEEDIEEFEANYRGSESEKNDLINLYKECKGNMDRLFCSMLCSDPKLDSHRFKDVIDEAIASGELKEMKAYKKWAKKIAETKPATSPLRRREKSNKEPKMDLYAMISQRRDERKGKFDSMFSSLISKYGGGHGPEPSEEDFEATQRKMERRSHAQRPVLRYRALYKFDYKAYVASFIRLPCRCHQSHQI 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02205 313 Pfam DnaJ domain 34 95 IPR001623 -
Car04g02205 313 Gene3D DnaJ domain 18 106 IPR036869 -
Car04g02205 313 PRINTS DnaJ domain signature 53 68 IPR001623 -
Car04g02205 313 PRINTS DnaJ domain signature 35 53 IPR001623 -
Car04g02205 313 PRINTS DnaJ domain signature 90 109 IPR001623 -
Car04g02205 313 PRINTS DnaJ domain signature 70 90 IPR001623 -
Car04g02205 313 Coils Coil 122 149 - -
Car04g02205 313 CDD DnaJ 33 87 IPR001623 -
Car04g02205 313 ProSiteProfiles dnaJ domain profile. 33 98 IPR001623 -
Car04g02205 313 MobiDBLite consensus disorder prediction 252 274 - -
Car04g02205 313 PANTHER CHAPERONE DNAJ DOMAIN PROTEIN 1 280 - -
Car04g02205 313 SUPERFAMILY Chaperone J-domain 32 108 IPR036869 -
Car04g02205 313 MobiDBLite consensus disorder prediction 257 274 - -
Car04g02205 313 MobiDBLite consensus disorder prediction 1 31 - -
Car04g02205 313 SMART dnaj_3 32 90 IPR001623 -
Car04g02205 313 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN-RELATED 1 280 IPR042977 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g02205 Car-Chr4 30851901 30874487 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g02205 24 95 C2H2 Transcription Factor Family AT1G74250 38.961 3.68e-09 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02205 K09529 - gmx:100781463 422.55