Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02197 ATGGAGCAAAGTACGCTCGAGTCCATTCAGTTCAACGAAGAAATTCTGGGAATCATGGCTCCGGCGCCGGAAACCGCGAACTCTTTCACCGCACTTCTCGAACTACCTCCGACGCAAGTCGTCGAGCTTCTCCACTCGTCGGAGCATACCGGAAAACTGCCTCTACACGTCAGTAACCCGAAACCCTATCCACTAACTTCCGTCATTTGCGGCGGTACAAGTAATTTGACCTTCCCTTCCAACGCCGCGTTGGTCGAACGCGCTGCAAGATTCTCCGTGTTCGCTGGAGAGAATCCGCCGCAGACGGAAGTGAAAGATGAGCAACAAGAGACCGATTCGAACCCGAGTTTAACTCAGGGAGGTGGTGACTGTGTCTCTGATCCCACCGTGGAGAACAAGAACTCCAAGGGTGCGAAGAGGAAGCAGCTAGAGAAGAAGGTTAAAGTGTCTTCTAAGAAGAGCAAGAGTATCGCCGATGAGAATTCCGGCAACGGCGAAGAGCTTCCGTATGTTCACGTTCGTGTTCGTCGAGGTCAAGCCACGGATAGCCATAGTTTAGCAGAAAGGGCTAGGAGAGAGAAGATAAATGCTCGAATGAAACTGTTACAAGAGCTGGTCCCCGGTTGCAACAAGATATCAGGAACGGCGTTGGTTTTGGATAAAATCATCAACCATGTACAATCTCTACAGCATGAAGTGGAGGTCAGATTTTTATATCACAGGCATTTTAGGCAATTATTTAGACAAACAAAGAGAATGACAAAGTTGATAGCAGCAATTTGGTTCTCAATATAA 795 0.483 MEQSTLESIQFNEEILGIMAPAPETANSFTALLELPPTQVVELLHSSEHTGKLPLHVSNPKPYPLTSVICGGTSNLTFPSNAALVERAARFSVFAGENPPQTEVKDEQQETDSNPSLTQGGGDCVSDPTVENKNSKGAKRKQLEKKVKVSSKKSKSIADENSGNGEELPYVHVRVRRGQATDSHSLAERARREKINARMKLLQELVPGCNKISGTALVLDKIINHVQSLQHEVEVRFLYHRHFRQLFRQTKRMTKLIAAIWFSI 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02197 264 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 1 235 - -
Car04g02197 264 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 177 245 IPR036638 GO:0046983
Car04g02197 264 SMART finulus 185 235 IPR011598 GO:0046983
Car04g02197 264 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 179 229 IPR011598 GO:0046983
Car04g02197 264 MobiDBLite consensus disorder prediction 95 165 - -
Car04g02197 264 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 1 235 IPR024097 GO:0006355
Car04g02197 264 Pfam Helix-loop-helix DNA-binding domain 183 230 IPR011598 GO:0046983
Car04g02197 264 MobiDBLite consensus disorder prediction 111 132 - -
Car04g02197 264 Gene3D - 176 240 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g02197 Car-Chr4 30432909 30438705 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g02197 6 235 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G57800 53.077 1.37e-60 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Car04g02197 HLH 2.9e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02197 - - aprc:113872810 339.347
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02140 03 67625403 67633702 Car04g02197 04 30432909 30438705 PCT