Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02194 ATGAGTATTTGCTTTCCTGTTAGTCAATCTTCAATAAGTGCTGTTGTCGTGAAAGGTCGTACTCAGCTGCTGATGAGCAGTAACATCTGCGGTCTTCAGTCCAGAGGAATATCCTGTTCATTTTCTTCTGGTTTTTACCCAGGGAAGTCGGGGAAAAATTATGTTGGTCTTTCTATTTGCACAAAACCATCTTGTTCAACTGTCATGGGCCAAACAATAAGAGGAGGTTACCTTGGATCATGCTGCTCCAAGCAAAGGGGAAGTACTCAACTCTTTAATTCTATAGTATCACGGAAGAAGCATCGTGAAATTTCATTGGCATGCCAAAGTATGAGTATGAGACTGTTGGTACCTAAACAAAAAATGCTTTCCAAAGTTAAGTGTAATGTTGGGCGAATAAATTGGCCACGCAGTTGTGCATCTGTTGGTTTTATTTTTGGATTGTTTGTGTGTAATTTAAGTTCTGAACCTGCGCATGCTGAGGCAGATTATGAAAATAGGAAAAGGAACGATGACTGCGACGAGACAAATGTTAAAGTCTCACACGGGAAGCAAGTTTACACCGACTATTCTGTAATTGGAATACCTGGGGATGGAAGATGCTTGTTCCGCTCGGTTGCTCATGGGGCTAGTTTGAGGTCTGGAAAACCCCCTCCTAGTGAAAGATTTCAGAGAGAGCTAGCAGATGATTTACGGGCCAAGGTTGCTGATGAGTTTGTCAAAAGAAGGGAAGAAACAGAATGGTTTATTGAAGGTGACTTTGATTCATATATTTCACAAATAAGGAAGCCTCATGTATGGGGAGGTGAACCCGAATTGTTCATTGCTTCACATGTTTTGCAGATGCCAATCACTGTATACATGTATGATCAGGATGCTGGTGGATTGATATCAATAGCTGAGTATGGCCAAGAATACGGCAAGGAAAATCCAATTAGAGTTCTCTATCATGGGTTTGGTCATTATGATGCATTAGATATTCCTAAAAGGAAGGGCCCTAAATCACGACTCTAG 1014 0.4122 MSICFPVSQSSISAVVVKGRTQLLMSSNICGLQSRGISCSFSSGFYPGKSGKNYVGLSICTKPSCSTVMGQTIRGGYLGSCCSKQRGSTQLFNSIVSRKKHREISLACQSMSMRLLVPKQKMLSKVKCNVGRINWPRSCASVGFIFGLFVCNLSSEPAHAEADYENRKRNDDCDETNVKVSHGKQVYTDYSVIGIPGDGRCLFRSVAHGASLRSGKPPPSERFQRELADDLRAKVADEFVKRREETEWFIEGDFDSYISQIRKPHVWGGEPELFIASHVLQMPITVYMYDQDAGGLISIAEYGQEYGKENPIRVLYHGFGHYDALDIPKRKGPKSRL 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02194 337 Pfam OTU-like cysteine protease 196 322 IPR003323 -
Car04g02194 337 Gene3D - 171 332 - -
Car04g02194 337 PANTHER OTU DOMAIN CONTAINING PROTEIN 13 337 - -
Car04g02194 337 SUPERFAMILY Cysteine proteinases 189 325 IPR038765 -
Car04g02194 337 ProSiteProfiles OTU domain profile. 190 328 IPR003323 -
Car04g02194 337 PANTHER OS09G0487700 PROTEIN 13 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g02194 Car-Chr4 30349802 30354762 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g02194 195 335 C2H2 Transcription Factor Family AT1G50670 26.056 9.72e-06 44.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02194 - - ccaj:109795157 559.681
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g02194 04 30349802 30354762 Car03g02722 03 72870086 72871827 PCT