Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02193 ATGCCACCTCATCATACTCACATTTGCAACATCATAACTCTCCTCTGTGTCTGCTTCTTCATTCCCTTCACTTCATGTCTCAACTCAGACGGTCTCTCACTACTCGCTCTTAAAGCCGCAATCGACGTGGACCCCACTGGAGTCCTCAACTCGTGGTCCGACTCAGTACTCACACCATGCCAATGGGAAGGAGTATCATGCAACACAAACAACGACCGAGTCACTCAACTCACTCTCCCTTCAAAATCCCTAACAGGTTACTTACCCTCCGAATTAGGCCACCTCACTGAACTAACAACCCTTAATCTCCCAAACAACAACTTCACTAGAACCATTCCTTCATCACTCTTCAACACCGTCAACAAACTCCTTTTCTTAGACCTTTCTCATAACTCTTTCACTGGTCCTCTTCCTCTCTCACTTACTTCGCTTAAATCTCTTCTACATTGTGATTTATCTTCCAATTTTCTTAACGGCTCTATTCCTGAGTCGCTTACCGAATTAACCGCTGTTACCGGTACTTTAAATCTTTCTCATAATAGTTTTTCCGGTGAGATACCGCCTTCACTCGGTAACCTTCCGGTGGAAGTTAGTTTGGATCTATGTTATAATAATCTCACCGGAGAAATTCCACAGGTGGGGTCCTTACTTAATCAAGGACCTACTGCTTTTTCCGGAAATCCCGGACTTTGCGGGTTTCCGTTACGGAACGGTTGTTCGCAAAAGGTTCCTGATGTTTTACCTGATGACGATGATCCGGAAAACCCTAACTCGAAACCGAACGCGATTCGAACCGGTCCGATTCGAGATGAGAGGCAGCGGGGTGGTttgttttttgttgtgattgttgttgtggttttgatttctcttgcgtcagtggttgttttgatgtCGGCGTGGATTTTCCGGCGAAGGAAGAGGTTGAATTCTGTGAAGGGTGGGTTTGAAAAGGGAAAGGTGGATGGTGAGGTTTTGGGTTCCGGGGAAGAGCAGAAGGGTAGATTTGTGGTGGTGGATGAAGGGTTTGGGTTGGAATTGGAGGATTTGTTGAGGGCTTCTGCTTATGTGGTGGGGAAGAGTAGGAGTGGGATTGTTTATAAGGTTGTTGGTGTCGGGAAAGGGTCGGTTCCGGCAATGGCGACCGCAGTGGCAGTTAGACGGTTGAGTGAGGGTGATGATGCAGCTTTACGGTTTAAGGAATTTGAGAATGAAGTGGAGGCTATTGGGAAAGTGCGGCACCCTAATGTTGTTCCTTTGAGAGCTTATTACTATGCAAGTGATGAGAAACTTCTCATTACTGATTTCATTCGCAATGGAAGCTTGCACACTGCATTGCATGGTGGGCCTTCGGAATCATTGCCGCCATTATCATGGGCAGCAAGATTAAAAATTGCTCAAGGAACGGCAAGGGGATTGATGTACATACACGAGTTTAGTGGTAGGAAGTACGTCCATGGCAACATAAAATCAACGAAAATACTATTAGATGATGATCTCCATCCTTACATATCTGGTTTCGGACTTACCCGACTTTGTTTGGGTACCTTAAAATCTACCACCGCATTTGCACATAAGCGGCAGAATTCAAATCAGTCTATTGTAGCCTCCGCAATGAGCTCAAAAGTTGCTGCGTCCTCTAAGAACTACATTTCCCCTGAAGTGCGCATGGCCGGTGGAAAATTCACTCAGAAATGTGATGTCTATTCTTTTGGTATCGTGTTGTTGGAACTTTTGACAGGTCGGTTTCCGGATTTAGGACCAGAAAATGATCACAAGGAGTTAGAGAGTTTTGTGCGGAAAGCATTCAGGGAGGAACAGCCCTTGTCAGAGATTATAGATCAAACACTCCTACCTGAGGTTAATGCTAAAAAACAAGTTGTTGCGGCGTTTCATATTGCATTGAACTGCACAGAACTTGATCCAGAATTGCGACCGAGAATGCGAACTGTGTCTGAGAGCCTTGATCACATCAAAATTCAGTAA 1983 0.4397 MPPHHTHICNIITLLCVCFFIPFTSCLNSDGLSLLALKAAIDVDPTGVLNSWSDSVLTPCQWEGVSCNTNNDRVTQLTLPSKSLTGYLPSELGHLTELTTLNLPNNNFTRTIPSSLFNTVNKLLFLDLSHNSFTGPLPLSLTSLKSLLHCDLSSNFLNGSIPESLTELTAVTGTLNLSHNSFSGEIPPSLGNLPVEVSLDLCYNNLTGEIPQVGSLLNQGPTAFSGNPGLCGFPLRNGCSQKVPDVLPDDDDPENPNSKPNAIRTGPIRDERQRGGLFFVVIVVVVLISLASVVVLMSAWIFRRRKRLNSVKGGFEKGKVDGEVLGSGEEQKGRFVVVDEGFGLELEDLLRASAYVVGKSRSGIVYKVVGVGKGSVPAMATAVAVRRLSEGDDAALRFKEFENEVEAIGKVRHPNVVPLRAYYYASDEKLLITDFIRNGSLHTALHGGPSESLPPLSWAARLKIAQGTARGLMYIHEFSGRKYVHGNIKSTKILLDDDLHPYISGFGLTRLCLGTLKSTTAFAHKRQNSNQSIVASAMSSKVAASSKNYISPEVRMAGGKFTQKCDVYSFGIVLLELLTGRFPDLGPENDHKELESFVRKAFREEQPLSEIIDQTLLPEVNAKKQVVAAFHIALNCTELDPELRPRMRTVSESLDHIKIQ 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02193 660 Gene3D Phosphorylase Kinase; domain 1 343 435 - -
Car04g02193 660 Pfam Protein tyrosine and serine/threonine kinase 357 654 IPR001245 GO:0004672|GO:0006468
Car04g02193 660 SUPERFAMILY L domain-like 25 236 - -
Car04g02193 660 ProSiteProfiles Protein kinase domain profile. 351 659 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g02193 660 PANTHER RECEPTOR PROTEIN KINASE-LIKE PROTEIN ZAR1 11 660 - -
Car04g02193 660 Gene3D Ribonuclease Inhibitor 22 80 IPR032675 -
Car04g02193 660 Gene3D Ribonuclease Inhibitor 81 242 IPR032675 -
Car04g02193 660 MobiDBLite consensus disorder prediction 242 267 - -
Car04g02193 660 SUPERFAMILY Protein kinase-like (PK-like) 356 654 IPR011009 -
Car04g02193 660 Pfam Leucine rich repeat N-terminal domain 28 68 IPR013210 -
Car04g02193 660 Gene3D Transferase(Phosphotransferase) domain 1 436 660 - -
Car04g02193 660 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 11 660 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g02193 Car-Chr4 30328900 30332942 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g02193 27 658 Receptor kinase-like Gene Family AT3G57830 57.430 0.0 689
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Car04g02193 PK_Tyr_Ser-Thr 4.2e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02193 - - gmx:100778816 795.808