Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02192 ATGGATTCCAATACTCATCAGAGTTATCTACTCAAACAACAGAACCAACCCATTTCTGGATTGCTTCGTTTTCGTTCTGCACCAACTTCACTTCTTTCAAACAAAGAtagtaatagtagtagtagtaATCATTTTTGGGAGTGTTCTGATAATATTAATTCTGGTTCATCTAGTTTTCAAGAGTTTGAAGAAaataataataataataaGACTTGTTCTAAGGAATTGAGTGAAATGAATTCTTCTGGTTATGGTGGTGGTTTGCCACCTCATTATCCTAGACATGGTTCTGGTGTTACTTCAAGTTCTGCTATGAATGGTTCTTTTGGATTGGGAATGGAACATGAAACAACACATAAGAGCTTTCCTTCAAATCTTCTTAGGCAGGGTAGTTCCCCTGCTAGTCTTTTCTCCAACATTTCCTTTCAAAATGGGTTTGCATTCATGAAAGGTGTTGGAAACTATGCTGAAGCGAATGGAAGTAACGACGAACTTAGTCCGTCGATTAATCGATTGAACAGTCAGGTTAGCTTTCCTTCAAGAAATGCTTCTTCATTGGGAATATTGTCACAAATCACTGAAATAGGGAGTGAGGATATTGAAGCAACTAGTCCTGATGATGGAAGAGAAAGAAGTAGCAATGGCGATGCAACACATTACGGTTCTGGATTTCCCTATAGTTCTTGGAATGATACTCAAACATTCTCAGAAAATCTCAGTGGTTTGAAAAGAGGGCGAAGCGGTAACGAAAAAATGTTTTCTGATATTCAGAGTGGAGGGTTTGGAAATCAAGTTCATACATTATCACATCACTTGAGTTTACCAAAGACTTCATCTGAAATGATTGCTATGGAGAAATTGCTTCAGTTCTCAGATTCTGTTCCTTGTAAAATCAGAGCGAAACGAGGTTGTGCTACTCATCCTCGAAGCATTGCTGAAAGGGTAAGAAGAACTAAGATCAGTGAAAGAATGAGGAAATTACAAGAGCTTGTTCCAAACATGGATAAGCAAACTAACACAGCAGACATGTTGGACTTGGCTGTTGATTACATTAAAAATCTTCAGAAACAATTCAAGTCTCTAAGTGAAAAACGAGCTAGCTGCAAATGTATGAGGATGCAGAAGGCAGATACAAATCAAATTTGA 1146 0.37 MDSNTHQSYLLKQQNQPISGLLRFRSAPTSLLSNKDSNSSSSNHFWECSDNINSGSSSFQEFEENNNNNKTCSKELSEMNSSGYGGGLPPHYPRHGSGVTSSSAMNGSFGLGMEHETTHKSFPSNLLRQGSSPASLFSNISFQNGFAFMKGVGNYAEANGSNDELSPSINRLNSQVSFPSRNASSLGILSQITEIGSEDIEATSPDDGRERSSNGDATHYGSGFPYSSWNDTQTFSENLSGLKRGRSGNEKMFSDIQSGGFGNQVHTLSHHLSLPKTSSEMIAMEKLLQFSDSVPCKIRAKRGCATHPRSIAERVRRTKISERMRKLQELVPNMDKQTNTADMLDLAVDYIKNLQKQFKSLSEKRASCKCMRMQKADTNQI 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02192 381 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 13 374 - -
Car04g02192 381 Gene3D - 305 379 IPR036638 GO:0046983
Car04g02192 381 PANTHER TRANSCRIPTION FACTOR BHLH130 13 374 - -
Car04g02192 381 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 307 371 IPR036638 GO:0046983
Car04g02192 381 Pfam Helix-loop-helix DNA-binding domain 309 355 IPR011598 GO:0046983
Car04g02192 381 MobiDBLite consensus disorder prediction 197 225 - -
Car04g02192 381 SMART finulus 310 360 IPR011598 GO:0046983
Car04g02192 381 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 304 354 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g02192 Car-Chr4 30271697 30275359 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g02192 1 359 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G42280 48.138 3.09e-94 284
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Car04g02192 HLH 6.9e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02192 - - gmx:100819605 509.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02142 03 67652741 67655181 Car04g02192 04 30271697 30275359 PCT