Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02182 ATGGGGTTTTCTTTGTCTATTGAAGCAACAGAACAACAAAAACAAGATACAATGTTTTTAGGTTCCAACAATTCTATGGCTTCTTCAAGTATTGTTAAGAACACAACAAATCAACTTGAACCACTCCCtcaacaacaaaatcatcatcttcatcatcatcaacatcaacatcaacatcagcatatgcatgaccatcaaatttcttttggcatgatgacatcttcatcatcatcctctatcCCTGGAAACTATTTAAGCAAAGATTCAAGTACTTATGATTTGGGTGAATTGGATCAAGCTTTTTTTTTGTATTTGGATGGACAAGCTGATCCTTCCAGTCTTCAAGATCAAAGACAAGAGAGTTCATTTTCAGGAATGAAACCACCACCAACTCTTAACATTTTTCCATCTCAACCTATGCATGTAGCACCACCACCATCCAATTCAAAGGCTAGCATGGGATTACCTTCTCCACAAACCAGTGGTTCCAAGAAACAATCTCAACCGTCCGTTGAGTTGGCCAACCAACGGAACGAAACCCTCTCTGCACCTGCACCATCCAAATCTATAATAAAGAGAGAGAACAATCGCAAGGGTACAACTTCAAGTTCTGAACAAGAAGGACCTAAAACACCAGATCCTAAGACTCTGAGAAGACTTGCTCAGAATAGAGAAGCAGCAAGGAAAAGCAGGCTTAGGAAAAAGGCTTATGTTCAGCAGCTAGAAACAAGTAGGATTAAGCTTAATCAGCTTGAACAAGAGTTGCAGCGTGCTAGAGCTCAAGGTATGTTAATGGGTGGAGGTGCAATTTTGGGAGGAGATCAAGGCATGCCAATTTCTATGAATAGCATTACCTCAGAGGCTGCAATGTTTGATATGGAATATGGGAGGTGGTTAGAGGAACACCACAGACTAGTGTGTGAGCTAAGAGCTGCAGTACAAGAACACTTAAATGAAAATGAGCTGAGGATATATGTTGAAAATTGCTTATCTCACTATGATCAAGTTATGAACCTTAAAACAATTCTAGCTAGAACAGATGTTTTTCATCTTGTTTTTGGCATGTGGAAAACCCCAGCTGAACGTTGCTTCATGTGGATTGGTGGATTCAGACCATCTGAACTAATTAAGGTAATCATAAGTCAAATTGAACCTCTAACAGAACAACAAATACTTGGTATATGTGGATTGCAACAATCAACACAACAAGCAGAAGATGCTCTTTCTCAAGGGCTTGATGCCCTAAACCAATCTGTCTCTCAGACTATAACATCAGACTCTTTGAGTTGTCCTCCCAATATGACTAACTACATGGGACAAATGGCTTTGGCCATGAACAAACTCTCTTCTCTTGAAGGTTTTGTGAGACAGGCAGATAATCTGAGGCACCAAACAATTCATCGTCTGCATCAGATGTTAACAATTCGTCAAGCTGCAAGGTGTTTGGTTGCTATGTCTGAGTACTTCCATCGTCTTCGAGCATTGAGTTCACTCTGGTTGACACGCCCTCGTCAAGAATAG 1521 0.3761 MGFSLSIEATEQQKQDTMFLGSNNSMASSSIVKNTTNQLEPLPQQQNHHLHHHQHQHQHQHMHDHQISFGMMTSSSSSSIPGNYLSKDSSTYDLGELDQAFFLYLDGQADPSSLQDQRQESSFSGMKPPPTLNIFPSQPMHVAPPPSNSKASMGLPSPQTSGSKKQSQPSVELANQRNETLSAPAPSKSIIKRENNRKGTTSSSEQEGPKTPDPKTLRRLAQNREAARKSRLRKKAYVQQLETSRIKLNQLEQELQRARAQGMLMGGGAILGGDQGMPISMNSITSEAAMFDMEYGRWLEEHHRLVCELRAAVQEHLNENELRIYVENCLSHYDQVMNLKTILARTDVFHLVFGMWKTPAERCFMWIGGFRPSELIKVIISQIEPLTEQQILGICGLQQSTQQAEDALSQGLDALNQSVSQTITSDSLSCPPNMTNYMGQMALAMNKLSSLEGFVRQADNLRHQTIHRLHQMLTIRQAARCLVAMSEYFHRLRALSSLWLTRPRQE 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02182 506 CDD bZIP_HBP1b-like 215 267 - -
Car04g02182 506 ProSiteProfiles DOG1 domain profile. 288 502 IPR025422 GO:0006351|GO:0043565
Car04g02182 506 PANTHER TRANSCRIPTION FACTOR TGA9 102 505 - -
Car04g02182 506 MobiDBLite consensus disorder prediction 45 64 - -
Car04g02182 506 SMART brlzneu 211 264 IPR004827 GO:0003700|GO:0006355
Car04g02182 506 MobiDBLite consensus disorder prediction 111 218 - -
Car04g02182 506 MobiDBLite consensus disorder prediction 150 185 - -
Car04g02182 506 PANTHER BZIP TRANSCRIPTION FACTOR TGA10 102 505 - -
Car04g02182 506 Coils Coil 234 261 - -
Car04g02182 506 Gene3D - 214 264 - -
Car04g02182 506 SUPERFAMILY Leucine zipper domain 215 257 IPR046347 GO:0003700|GO:0006355
Car04g02182 506 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 213 257 IPR004827 GO:0003700|GO:0006355
Car04g02182 506 MobiDBLite consensus disorder prediction 111 128 - -
Car04g02182 506 Pfam Seed dormancy control 306 380 IPR025422 GO:0006351|GO:0043565
Car04g02182 506 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 218 233 IPR004827 GO:0003700|GO:0006355
Car04g02182 506 Pfam bZIP transcription factor 215 254 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g02182 Car-Chr4 29981960 29992642 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g02182 82 506 Basic region leucine zipper (bZIP) Transcription Factor Gene Family AT5G06839 62.387 0.0 541
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Car04g02182 DOG1 1.1e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02182 K14431 - gmx:100800059 722.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02151 03 67728441 67735053 Car04g02182 04 29981960 29992642 PCT