Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02177 ATGGTTCGTAACTACGTTTACGTGAATCTCGTCTTCGCTGTTTTCTCGGCAACTTTGATTTCTCAGTGTTTGGCATTCACTGATCCACTTGACGTCACAGCTCTCCAGGAAATGTATAAGACCTTAAACAACCCACAAGTGCTGCAAGGATGGAGCGGTGGTGATCCTTGTGAGGAGTCTTGGACAGGAGTAGCTTGTTCTGGGTCCTCAGTTATACACCTAAAAATTCAAAGGTTGAACCTCACTGGATATCTTGGAGCATCTCTCTATAATCTACAAAATTTGAAGATATTTGATGTCAGTTCCAACAGCATAACAGGTGAAATACCATATGGTTTACCTCCCAATGCCACACATATAAACATGGCTTGCAACTATTTGAGCGAAAATATCCCCCACTCATTATCAAATATGAAAAAACTAAGACATCTGAATTTAAGCCACAATTTTTTATATGGACCAATTGGCAATGTTTTCACTGGCTTAGATAATCTCAAAGAAATGGACCTTTCATACAATAATTTCACAGGAGATCTGCCAAGTTCATTTGGTTCCTTGGTAAACCTTGAGATATTGTTCCTGCAGAATAACAGATTTACTGGATCGGTCACGTACCTGGCTGAGCTTCCACTCATTGATTTGAACATTCAAGAAAATCTTTTTAGTGGCATTCTTCCACAACATTTTCAGTCCATACCAAACCTATGGATTGGTAGCAATATGTTCCATGCAGTGGACGGCTCTCCTTCCTGGACATTTCCTTTGGACAGTGTACCAGTTGAGCACAATACAAGTCGCCCACCGACAACCCAAGCAAATGCTATAGAGAATTATGCTCCCCTTAATGTAAGAAAGCACAAGAAGAAACGAATGGGTCCTGGAGGAATAGCTTTTATGGTTGGTGGGGGAACATTATTGGTAACAGGATTGGCACTCTTCATAGCGATCCGGTTGAATACATTTCACACTCAGAGACTGAAGAGCTTCCCCTTGGAAAGCAACCACCATAGTTCATTTTCTTCTCATCCATTTCCTTCTAATCCAATCAGGGAAGCCAAAGAGGTCTCTTCTACGGCATTAGATGATAGCCTGCAAATTCCACCTTTCAATGCTGCATCCCTTTTGGATCCAAGGAGATTGCCTTTCCAGAACCATAAAAGAATGGGGGAAACATCAAGAAGGAGTTTTTCTGAAAGAGACAAATTCAATGGAAGGACAAAGGTTTACACAGTAGCTGAGGTTGAGTTGGTTACTAACAGCTTCAGTGAAGAAAACCTTCTGGGTGTAGGGTCTCTTGGCCCAGTTTACAGAGCTGAATTCCCAGATAGCAAGGTTTTGGCAGTGAAGAATATTCAAATGGCGGGCCTGTCTTTCAGTGAAGAGGAAAAATTCTTAGATGTTGTCTGTACAGCTTCCCGTCTGAAGCACCCCAACATCATTGCACTTAAAGGTTACTGTTTGGAGCACGGACAACATCTTCTTGTCTACGATTATGTCAGAAATTTAACTCTAGACGATGCTCTACACAGTGCAGCATACAAACCTTTATCTTGGGGCATCCGTTTAAGAATTGCTCTAGGTGTTGCACAAGCTCTTGACTATCTGCACTCCACGTTCTCCCCTCCTGTCGCCCATGGCGACTTGAAGGCTGCCAATATTATGCTGGACGAAAATCTGATGCCTCGTGTTTCTGACTGTGCATTGGCTATATTAAAACCACTGACCAACACTAAAGCCAAAATTCGGGCTTCTGAGATTGCTATTAGAGATACTGGGTACAGTTCACCTGAACATGGCCAACTGGGAATTAGCAACACAAAGAGTGATGTCTTTGCCTTTGGGGTGTTGCTTTTGGAGCTGTTATCAGGAAGAAAACCTTTTGAAAGTTTTATGCCAAAGGAAGAGCAGTATCTAGTAAATTGGGCTTCGACAAGGCTTCATGATAACGAGAGTTTGGAGCAGATGGTGGATCCTGCAATTAAAAGAACATTCTCATCCAAGGCTCTTTCTCGTTATGCTGATATCATCTCCCTATGCACTCAGCCTGTGAAGGAATTTCGATCTCCAATGTCTGAAATAGTGGACTCTCTTGTATCTTTTATGCAAAAGCTCAACTTGTCAAAGAGTTGCGGTGGTGTAGCAGCAGATGGAACTGAACTTGACCCACTTGAGAGGTCTTTCCGTACAACCACCTCCCGATTTATGCCTTCACCCTCATTGAGCTATGTATCCGCCTGA 2238 0.4258 MVRNYVYVNLVFAVFSATLISQCLAFTDPLDVTALQEMYKTLNNPQVLQGWSGGDPCEESWTGVACSGSSVIHLKIQRLNLTGYLGASLYNLQNLKIFDVSSNSITGEIPYGLPPNATHINMACNYLSENIPHSLSNMKKLRHLNLSHNFLYGPIGNVFTGLDNLKEMDLSYNNFTGDLPSSFGSLVNLEILFLQNNRFTGSVTYLAELPLIDLNIQENLFSGILPQHFQSIPNLWIGSNMFHAVDGSPSWTFPLDSVPVEHNTSRPPTTQANAIENYAPLNVRKHKKKRMGPGGIAFMVGGGTLLVTGLALFIAIRLNTFHTQRLKSFPLESNHHSSFSSHPFPSNPIREAKEVSSTALDDSLQIPPFNAASLLDPRRLPFQNHKRMGETSRRSFSERDKFNGRTKVYTVAEVELVTNSFSEENLLGVGSLGPVYRAEFPDSKVLAVKNIQMAGLSFSEEEKFLDVVCTASRLKHPNIIALKGYCLEHGQHLLVYDYVRNLTLDDALHSAAYKPLSWGIRLRIALGVAQALDYLHSTFSPPVAHGDLKAANIMLDENLMPRVSDCALAILKPLTNTKAKIRASEIAIRDTGYSSPEHGQLGISNTKSDVFAFGVLLLELLSGRKPFESFMPKEEQYLVNWASTRLHDNESLEQMVDPAIKRTFSSKALSRYADIISLCTQPVKEFRSPMSEIVDSLVSFMQKLNLSKSCGGVAADGTELDPLERSFRTTTSRFMPSPSLSYVSA 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02177 745 MobiDBLite consensus disorder prediction 332 357 - -
Car04g02177 745 Pfam Leucine rich repeat 158 199 IPR001611 GO:0005515
Car04g02177 745 Gene3D Phosphorylase Kinase; domain 1 383 498 - -
Car04g02177 745 Pfam Protein tyrosine and serine/threonine kinase 424 671 IPR001245 GO:0004672|GO:0006468
Car04g02177 745 Gene3D Ribonuclease Inhibitor 29 259 IPR032675 -
Car04g02177 745 SUPERFAMILY Protein kinase-like (PK-like) 398 697 IPR011009 -
Car04g02177 745 ProSitePatterns Serine/Threonine protein kinases active-site signature. 543 555 IPR008271 GO:0004672|GO:0006468
Car04g02177 745 PANTHER LEUCINE-RICH REPEAT TRANSMEMBRANE PROTEIN KINASE 1-LIKE PROTEIN 11 711 - -
Car04g02177 745 ProSiteProfiles Protein kinase domain profile. 421 701 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g02177 745 Gene3D Transferase(Phosphotransferase) domain 1 500 711 - -
Car04g02177 745 SUPERFAMILY L domain-like 30 236 - -
Car04g02177 745 SMART serkin_6 421 701 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g02177 745 Pfam Leucine rich repeat N-terminal domain 31 67 IPR013210 -
Car04g02177 745 PANTHER LEUCINE RICH REPEAT KINASE 2 11 711 - -
Car04g02177 745 Pfam Leucine Rich Repeat 140 153 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g02177 Car-Chr4 29728431 29733663 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g02177 15 745 Strubbelig Receptor Gene Family AT5G06820 53.784 0.0 731
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Car04g02177 PK_Tyr_Ser-Thr 2.5e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02177 - - cam:101498175 1470.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02159 03 67775656 67778643 Car04g02177 04 29728431 29733663 PCT