Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02173 ATGGCTCTCGATTCTCTTCCAAGCAGGAATTTGAAACCCACAGATGAGGAACTTCTCAAATCATTCCTCTACAACAAAATTAACAATAACCCTTTGCCCAATCATATCAACATTCTTGAACATGATTTGTTTGGTATCAAAAAGAACCCTTGGGAAATTTGGGAAGAGTTTGAAGCTTCACACTCATATTGTGAAAAAGACTTATATTTCTTCACTCTCTTAAAGAAGAAATCAGCCACTAGCTCTCGTATGGTTCGTACTATTGGAATGGGTACATGGGAAGCTGAAGATGCCAAAAAAGACATAGTTGATAAAGAAACGTGTCAACTCTTAGGTAATAAAAAACGTTATCGATTTGAGAAGAGTGGCACTATCCACGATTATGAATGGATCTTGCATGAATATAAACTTGATATGTCTTTGATCAACAATTTTTCGGCCAAGAATTATGTTCTATGCAGATTTAGAAAAAATAATATAAGAAATAAAATCAAAATGCCAAGAAAAAGTACAAGAACAAAGAATGTTGGCCAACATAGAAGAAGGAAGATCATCATTGAACGACCGGAAACCACCGTATCGGAGAAAAATAATGTTTGGTTGGAGAAAAATACTGACCAAAGACCAAGAAATCAAGTAGACAATGGAAATAACAAGATTGACGTTGTTAACACTATCAATACATCAAAGTCTAAATATAACAAAGTAGAAGATGGTGACGACTACATTATGATCAAAGACGATGATGATATCGTTATGAACAAAGAAGAAGAATATGATGATCTAATTATGAACAAAGAAGTAGAAGATGGTGATGACTGCATTATGATCAAAGACGACGGTGATATCATTATGAATAAAGAAGTTTGTGATCTAATTATGAACAAAGAAGAAGAAGATGGTGATCTGATTATGAACAAAGAAGAGGAAGATGGCGATCAAAATATAATTGAGCCAGAGTTATTTGCAATGCAATTGAAAAGTGTTAACGAAGGATGCTTGATCGAAGAGGAAGATGTTCCAATGATTTCCAATGATTTTTATAAGTATTTATTGTTGGAAAATTTTTACATTAAGTAA 1080 0.3324 MALDSLPSRNLKPTDEELLKSFLYNKINNNPLPNHINILEHDLFGIKKNPWEIWEEFEASHSYCEKDLYFFTLLKKKSATSSRMVRTIGMGTWEAEDAKKDIVDKETCQLLGNKKRYRFEKSGTIHDYEWILHEYKLDMSLINNFSAKNYVLCRFRKNNIRNKIKMPRKSTRTKNVGQHRRRKIIIERPETTVSEKNNVWLEKNTDQRPRNQVDNGNNKIDVVNTINTSKSKYNKVEDGDDYIMIKDDDDIVMNKEEEYDDLIMNKEVEDGDDCIMIKDDGDIIMNKEVCDLIMNKEEEDGDLIMNKEEEDGDQNIIEPELFAMQLKSVNEGCLIEEEDVPMISNDFYKYLLLENFYIK 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02173 359 Pfam No apical meristem (NAM) protein 12 137 IPR003441 GO:0003677|GO:0006355
Car04g02173 359 SUPERFAMILY NAC domain 12 157 IPR036093 GO:0003677|GO:0006355
Car04g02173 359 Gene3D NAC domain 14 162 IPR036093 GO:0003677|GO:0006355
Car04g02173 359 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 12 267 - -
Car04g02173 359 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 12 267 - -
Car04g02173 359 ProSiteProfiles NAC domain profile. 5 158 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g02173 Car-Chr4 29669281 29671687 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g02173 7 163 NAC Transcription Factor Family AT5G13180 34.161 2.66e-17 79.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Car04g02173 NAM 1e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02173 - - cam:101507022 303.523