Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02168 ATGTCCATAAATCAATTGGAATCTCAACATCAAATTTTTGAGCCCTACAACATAGTCACTCCTCTAGAGGACATACCAACAATCATTCATGAATCAATTGCAAATGAAGCTTATATGAATTTTCAATCTCAACAACACCATCAACATCAAATTGATATTCCTCTTTGGACCAATGAATTTTCCATGACAACAACAAGAGACTCACCTTTTCTGTTTTGTCACGACTCTAAATTGGTTTTTGAATCTTTAATGTCTAATAGTGAAGGTGACGATAGTTTTTCTTCTTCTGAAAAGTGTAGTGAATTTCACTATTGTTCTCATAACAAGCAAATTTGTGAGCACCTTTCACAACAACATAAGAAGGTGTTGGAGTGTGATGATCCAACAGATCAAAAGTCCCATGAAGTTTCCTTTCAGAAAACTCAGAAGGAATCATGCACAAAGCAGTCTTCACCTTGTGACTTAGCTTTTGCAACACCTAGCAACTATGATTTTGAGATAACAGAAAAGGGTAAAAGAAGATTAAGATGGACAAAAGAATTGCATGAGACATTTATTATGATTGTCAACCGCCTTGGTGGTCCAGAAAATGCAAAGCCTAAGGCTATATTAGAGATGATGGGTTTGGATGTGCTAACCATTTCTCATGTTAAAAGTCATTTACAGAAATATCGTTCTACCTTCCACACGCACAAATCCTTGAATGGAATATCTGAGGAAGGACAAAAATCAAATGGGATTAATGAGCTTCAAATCAAAATTCAAATGCAAATAGAGGAATCGCGACAACTCCAACTTGAGGTTGAGAAGAGCAATCAACGGCAATTAGAGATGCAGCAAAATTTACAACTCGTTATTGAACATCAGAAGAAGCAACTCAAATTAATGTTAGATCAAAAAATGCAAAAAACCAAACTGAAGAAAATTTCTAATTCAGAATAG 942 0.3503 MSINQLESQHQIFEPYNIVTPLEDIPTIIHESIANEAYMNFQSQQHHQHQIDIPLWTNEFSMTTTRDSPFLFCHDSKLVFESLMSNSEGDDSFSSSEKCSEFHYCSHNKQICEHLSQQHKKVLECDDPTDQKSHEVSFQKTQKESCTKQSSPCDLAFATPSNYDFEITEKGKRRLRWTKELHETFIMIVNRLGGPENAKPKAILEMMGLDVLTISHVKSHLQKYRSTFHTHKSLNGISEEGQKSNGINELQIKIQMQIEESRQLQLEVEKSNQRQLEMQQNLQLVIEHQKKQLKLMLDQKMQKTKLKKISNSE 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02168 313 Pfam Myb-like DNA-binding domain 175 225 IPR001005 -
Car04g02168 313 Gene3D - 171 228 - -
Car04g02168 313 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 169 229 IPR017930 -
Car04g02168 313 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 7 309 IPR044848 GO:0003700
Car04g02168 313 Coils Coil 247 274 - -
Car04g02168 313 PANTHER MYB-LIKE DNA-BINDING DOMAIN, SHAQKYF CLASS PROTEIN 7 309 - -
Car04g02168 313 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 172 226 IPR006447 GO:0003677
Car04g02168 313 SUPERFAMILY Homeodomain-like 171 227 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g02168 Car-Chr4 29597874 29601906 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g02168 171 312 G2-like Transcription Factor Family AT4G28610 45.833 4.91e-29 113
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Car04g02168 Myb_DNA-binding 8.9e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02168 - - cam:101492316 481.1