Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02155 ATGTTTTCGTGGCTAGCAAGGATAGTTTCAGCGTGCTTAAGACCAGTGAGAAGATATGCAAGAATGAACAAGGAAGATGAAAATGGTTTGGATGATGAGTGTTCAACAAGTGAAGATGCTCTTGTTTGGTGTAGGGACCTTGAGAAACACTCGTGTGGTGAATTCTCTTTTGCTGTTGTTCAAGCTAATGAAGTGATTGAGGATCATAGTCAAGTTGAAACTGGTTCTGATGCTGTTTTTGTTGGTATTTATGATGGTCATGGTGGTCCTGATGCTTCTCGTTTCATCAATGATCACCTCTTTCTTCATCTCATAAGGATTGCTCAAGAAAATGGTTCTATATCCGAAGACATTATAAGGAATGCTGTTTCTGCTACTGAGGATGGATTTCTGACGCTTGTTCGAAGGAGCTACGGAATAAAGCCGCTAATAGCATCAATCGGTTCGTGTTGTCTTGTTGGGGTTATTCGGAAAGGGACACTATATATCGCGAATCTTGGAGACTCTCGCGCTGTGATCGGTTCAATATGTGGATCTAACAAGATCATTGCTGAACAGTTGACAAGAGAGCACAATGCCAGCAAAGAAGATATCAGAAGAGAACTCAGGTCTTTGCATCCAGAAGATTCACAAATTGTTGTTATGAAACATGGAACATGGCGCGTTAAAGGCATCATCCAGGTATCAAGATCTATAGGAGATGCATATTTGAAGCGTCCGGAGTTCTCCTTGGACCCTTCATTCCCGCGGTTCCACTTGCCTGATCCTATCCGCCGACCGGTACTAACGGCAGAACCATCTATATGCTCAAGAGTTTTACAGCCTAATGATAAATTCGTTATATTTGCATCTGACGGACTTTGGGAACATATGACAAATCAGGAAGCTGCGGAGATTGTTCATAACAACCCCCGAACCGGGATTGCTAGAAGACTTCTTCTGGCTGCTTTGAATGAGGCAGCAAGGAAAAGGGAAATGAGATATAAAGATCTGCAGAAGGTTGAAAAGGGGATTAGGCGTTTTTTCCACGACGATATCACAATCGTTGTTGTCTTCTTTGACCATGAGTTGCAAGAGAAGAATGTTTTAGTTCCTGAGGTTTCTATCAAAGGGTTTATTGACACAGTTGGACCATCAAATTTTAGAAATTTGCATGAAATGCAATGA 1167 0.4182 MFSWLARIVSACLRPVRRYARMNKEDENGLDDECSTSEDALVWCRDLEKHSCGEFSFAVVQANEVIEDHSQVETGSDAVFVGIYDGHGGPDASRFINDHLFLHLIRIAQENGSISEDIIRNAVSATEDGFLTLVRRSYGIKPLIASIGSCCLVGVIRKGTLYIANLGDSRAVIGSICGSNKIIAEQLTREHNASKEDIRRELRSLHPEDSQIVVMKHGTWRVKGIIQVSRSIGDAYLKRPEFSLDPSFPRFHLPDPIRRPVLTAEPSICSRVLQPNDKFVIFASDGLWEHMTNQEAAEIVHNNPRTGIARRLLLAALNEAARKREMRYKDLQKVEKGIRRFFHDDITIVVVFFDHELQEKNVLVPEVSIKGFIDTVGPSNFRNLHEMQ 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02155 388 PANTHER PROTEIN PHOSPHATASE 2C 68-RELATED 6 373 - -
Car04g02155 388 Pfam Protein phosphatase 2C 68 320 IPR001932 -
Car04g02155 388 ProSitePatterns PPM-type phosphatase domain signature. 80 88 IPR000222 GO:0043169
Car04g02155 388 SMART PP2C_4 34 351 IPR001932 -
Car04g02155 388 ProSiteProfiles PPM-type phosphatase domain profile. 54 353 IPR001932 -
Car04g02155 388 Gene3D - 26 362 IPR036457 -
Car04g02155 388 Coils Coil 314 334 - -
Car04g02155 388 CDD PP2Cc 55 353 IPR001932 -
Car04g02155 388 PANTHER ALPHABET, ISOFORM E-RELATED 6 373 - -
Car04g02155 388 SUPERFAMILY PP2C-like 60 354 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g02155 Car-Chr4 29235974 29240540 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g02155 1 381 PP2C-type Phosphatase Gene Family AT5G06750 68.041 0.0 539
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02155 K01102 - gmx:100778238 669.077