Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02153 ATGAACATGTCTATGCTACACAAATATCAATTCTTAGCATTTGTATTCAGCATCATATTCTTAACCAAAGTTACCTCTTTTTATTTCAATTTCCCAACTTTCCAACCAAATGATGAAGCAAATTTGTTACTAAGCAAAAACTCAAAAATTTACTTAGATGCCATCCAAATAACCCCAGACATTCGTGGCATAATAGTGAATTATTCAGGACGTGCTTTTTACAACAAGCCATACAAACTTTGGAACAAGAAAAAAATTGCTTCTTTCAACACCACTTTTGTTCTCAACATAACTCCTCAAACCTCCCCTGGTGGTGAAGGTGTAGCTTTTATCTTAACTCCAAATACAAATCTCCCTGAAAACAGTGAAGGAAAATGGCTTGGTATTGTAAATGCTTCCACAAATGGAACTTCAAAAGCTGAAATTCTTGCAGTTGAGTTTGACACAAAACAAAGTTCAACACAAGATGGTCCTAGCAATCATGTTGGAATCAATATTAATAGCATCAACTCTATCAAACAAACATCATTAACAAACACTAAGGTTAATCTTTCATCTGGTACTAGTGTTACTATAAGAATTCAATATTTTAATGATGTAATATCTGTTTTTGGTTCAATGAGTGAAACTTCACATGATTCTATGGAGACCCTTTTGGTTTCTCCTCCTCTTAATCTATCTTCTTATCTTAAACAAGAGGTTTTCGTCGGTTTCTCTGGCTCGACGAGCAATTACACCGAGCTAAATTGTGTAAAAGCATGGGAATTCATTGGTTTAGATATTGGAGATAATAACAAAAATAATCTCTTGTGGGTTTGGATTATAATTCCAATGGTGATACTCATAATTGGTTTGGTAACTTTCTTGATTTATTATTGGCAAAAAAGAAGAAACATAGAGATTCAAGAAGATGCATATCCAAGAATAGAGGATCAAATTCAACACTCATCTATGTCACCTAAGAAATATACATTAAAGGAATTGATAAAAGCAACAAATGGATTCAACCATCAAAACAAACTTGGTGAAGGTGGATTTGGAACTGTTTACAAGGGTATTCTTGGAAATAACAATAAAGAGATAGCTGTGAAAAGAGTTTCAAAAAATTCAAGACAAGGTAAACAAGAATTCGTAGCTGAAGTTACAACAATTGGAAGTCTTCACCATAAAAACTTAGTGAAACTAATTGGTTGGTGCTATGAAAAAAAAGAGCTTCTTCTTGTTTATGAGTACATGCCTAATGGAAGCTTAGACAAGTACCTATTTTTTCATCCAAATCAAAATTCTTATGCTACACTAAATTGGGAAACTAGACATAGTGTGATACATGGTGTGGCACAAGCGTTAGATTATCTTCACAATGGTTGCGAAAAAAGGGTGTTACATAGAGACATTAAAGCAAGCAACATAATGTTGGACTTAGAATTTAATGCAAAATTGGGTGATTTTGGATTAGCTAGAACAATTCAAAAGAAAAATGAAACTCATCATTCAACTAAGGAAATTGCAGGAACACCTGGTTATATGGCACCTGAAACTTTTTTAACAGGAAGAGCAACGGTTGAAACTGATGTGTATGGTTTTGGTGTACTTGTTTTAGAAGTTGTGTGTGGAAAAAGACCAGGGAATAATATTTATGCACAAGATGATTATAAAAATAGTATTGTGTATTGGGTTTGGGAGCTTTACGGAAAAGGGAATATACTTAGTGCTTTGGATAAAAGGGTAATTAGTAGTAGTGAAATGGATGATGAAGAAATTGAAATTGTGCTTGTTCTTGGGTTGGCTTGTTGTCATCCAAATCCACATGAAAGGCCAACTATGAGAAGTGTCTTGCAAGTTCTTAATGGAGAAGCTAATCCTCCAATGGTTCCTATTGATAGACCTGCTTTTGTTTGGCCAGCTATGCCTTCATCTTTTAAAGAAAATGAAGATAGTTCTCTTATTAATGGAACTCTCACTCCATTCACTGAAATTTCTGGCAGATAG 1989 0.3404 MNMSMLHKYQFLAFVFSIIFLTKVTSFYFNFPTFQPNDEANLLLSKNSKIYLDAIQITPDIRGIIVNYSGRAFYNKPYKLWNKKKIASFNTTFVLNITPQTSPGGEGVAFILTPNTNLPENSEGKWLGIVNASTNGTSKAEILAVEFDTKQSSTQDGPSNHVGININSINSIKQTSLTNTKVNLSSGTSVTIRIQYFNDVISVFGSMSETSHDSMETLLVSPPLNLSSYLKQEVFVGFSGSTSNYTELNCVKAWEFIGLDIGDNNKNNLLWVWIIIPMVILIIGLVTFLIYYWQKRRNIEIQEDAYPRIEDQIQHSSMSPKKYTLKELIKATNGFNHQNKLGEGGFGTVYKGILGNNNKEIAVKRVSKNSRQGKQEFVAEVTTIGSLHHKNLVKLIGWCYEKKELLLVYEYMPNGSLDKYLFFHPNQNSYATLNWETRHSVIHGVAQALDYLHNGCEKRVLHRDIKASNIMLDLEFNAKLGDFGLARTIQKKNETHHSTKEIAGTPGYMAPETFLTGRATVETDVYGFGVLVLEVVCGKRPGNNIYAQDDYKNSIVYWVWELYGKGNILSALDKRVISSSEMDDEEIEIVLVLGLACCHPNPHERPTMRSVLQVLNGEANPPMVPIDRPAFVWPAMPSSFKENEDSSLINGTLTPFTEISGR 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02153 662 SUPERFAMILY Protein kinase-like (PK-like) 316 615 IPR011009 -
Car04g02153 662 ProSitePatterns Serine/Threonine protein kinases active-site signature. 460 472 IPR008271 GO:0004672|GO:0006468
Car04g02153 662 SMART serkin_6 335 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g02153 662 SUPERFAMILY Concanavalin A-like lectins/glucanases 25 256 IPR013320 -
Car04g02153 662 Gene3D Transferase(Phosphotransferase) domain 1 412 621 - -
Car04g02153 662 ProSiteProfiles Protein kinase domain profile. 335 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g02153 662 Pfam Protein kinase domain 336 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g02153 662 PANTHER - 11 650 - -
Car04g02153 662 CDD STKc_IRAK 341 617 - -
Car04g02153 662 Gene3D Phosphorylase Kinase; domain 1 320 411 - -
Car04g02153 662 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 11 650 - -
Car04g02153 662 ProSitePatterns Legume lectins beta-chain signature. 143 149 IPR019825 -
Car04g02153 662 ProSitePatterns Protein kinases ATP-binding region signature. 341 364 IPR017441 GO:0005524
Car04g02153 662 Pfam Legume lectin domain 29 257 IPR001220 GO:0030246
Car04g02153 662 Gene3D - 25 268 - -
Car04g02153 662 CDD lectin_legume_LecRK_Arcelin_ConA 27 256 IPR001220 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g02153 Car-Chr4 29175981 29178211 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g02153 18 631 Receptor kinase-like Gene Family AT5G55830 36.747 1.29e-126 388
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Car04g02153 Pkinase 2e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02153 - - gmx:100785031 985.711