Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02145 ATGTTGTGCTGTGGAGGTACTGAAGAGGATTTTACCGGCCTAGCTGCAAGCCATTATAGTGCATCACCTATTGGGGGTAACGCATACGGTGGTGGTGGTGGAGGCGGCGATAGAGGAGAGCCGAGGAGCAATATTAAAGAATTAGCAATCGAGATACCGGCTATTCAATTGAATGAGTTAAACCGGTTAACTGATAACTTTGGTACAAGTGCGCTTATTGGAGAAGGTTCCTATGGGAGGGTTTTCCGCGCAAAATTGAGCAATGGTATGGATGCTGCAATTAAGAAGCTTGATACTAGTTCTTCACCCGAACCTGACTCCGATTTCGAATCACAGTTAGCAATTGTTTCAAGACTGAAGAATGACCATTTTGCGGAGTTGGTCGGATACTGTCTTGAGGGAAATAACAGAATTTTGATTTATCAATATGCTAGCCTTGGTTCCTTGCATGACACGTTACACGGAAGGAAAGGAGTTCAAGGGGCTGAACCTGGTCCAGTTTTAAATTGGAACCAAAGAGTGAAAATCGCATTTGGTGCAGCAAAAGGACTTGAGTTTCTTCATGAGAAGGTTCAACCTTCTATAGTTCATAGAGATGTTAGATCAAGCAATGTGTTGCTGTTTGATGATTATGAGGCTAAGATTGCAGATTTCAACTTGACAAATCAGTCTTCTGACACGGCGGCTCGGCTACATTCAACAAGAGTCTTGGGAACATTTGGCTATCATGCTCCAGAGTATGCTATGACAGGGCAAATAACTCAAAAAAGTGATGTTTACAGTTTTGGAGTTGTGCTTTTAGAACTCTTGACAGGAAGAAAGCCAGTGGACCATACAATGCCTAAAGGGCAACAAAGTCTTGTAACATGGGCAACTCCAAGACTAAGTGAAGACAAAGTGAAACAATGTGTGGATCCTAAACTAAACAATGACTACCCGCCAAAAGCAATTGCTAAGTTGGCAGCAGTTGCAGCACTTTGTGTTCAATATGAAGCTGATTTCAGGCCAAACATGACAATTGTTGTAAAAGCTCTTCAGCCACTTCTCAATTCAAAACCAGCTGGACCTGATCAATCTAAT 1080 0.4241 MLCCGGTEEDFTGLAASHYSASPIGGNAYGGGGGGGDRGEPRSNIKELAIEIPAIQLNELNRLTDNFGTSALIGEGSYGRVFRAKLSNGMDAAIKKLDTSSSPEPDSDFESQLAIVSRLKNDHFAELVGYCLEGNNRILIYQYASLGSLHDTLHGRKGVQGAEPGPVLNWNQRVKIAFGAAKGLEFLHEKVQPSIVHRDVRSSNVLLFDDYEAKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQSLVTWATPRLSEDKVKQCVDPKLNNDYPPKAIAKLAAVAALCVQYEADFRPNMTIVVKALQPLLNSKPAGPDQSN 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02145 360 Gene3D Phosphorylase Kinase; domain 1 37 143 - -
Car04g02145 360 SMART tyrkin_6 67 345 IPR020635 GO:0004713|GO:0006468
Car04g02145 360 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 1 358 - -
Car04g02145 360 ProSitePatterns Tyrosine protein kinases specific active-site signature. 195 207 IPR008266 GO:0004672|GO:0006468
Car04g02145 360 PANTHER OS03G0226300 PROTEIN 1 358 - -
Car04g02145 360 ProSitePatterns Protein kinases ATP-binding region signature. 73 96 IPR017441 GO:0005524
Car04g02145 360 Gene3D Transferase(Phosphotransferase) domain 1 145 357 - -
Car04g02145 360 PIRSF ILK 41 354 - -
Car04g02145 360 Pfam Protein tyrosine and serine/threonine kinase 72 345 IPR001245 GO:0004672|GO:0006468
Car04g02145 360 SUPERFAMILY Protein kinase-like (PK-like) 47 345 IPR011009 -
Car04g02145 360 ProSiteProfiles Protein kinase domain profile. 67 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g02145 Car-Chr4 28722530 28726710 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g02145 57 352 Receptor kinase-like Gene Family AT3G58690 44.781 1.05e-85 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Car04g02145 PK_Tyr_Ser-Thr 1.2e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02145 - - gmx:100786291 591.267
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02195 03 68029197 68033227 Car04g02145 04 28722530 28726710 PCT