Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02142 ATGAAGTTTGTTAATGGTGACAACAAGAGAAAGCTAAAACGCAAGATGGAGGAAATATCAAAACCTCATTCTTGTGCAGCTGATTCAGAGGTGTCACTATCTCTAACTCTAAGTCTAGGAGAACGTAGATCTTCTTTTCCATTCAAATCCCTTAAAAGGGAATACCCATGCAAGTTTTGCAACAAGAAATTTTTAAGTTCTCAAGCCTTAGGAGGACACCAACATGCACATAGACATGAAAGGATGCTATCAAGAATAGACAAATTAGAGTTTCAAATGGAAACTCTTGGACTACTTTCTTCTCATCAAGTGTATCCATACTCATCCATTTCAAATCTTCATCAATATGAAATTGACTCACCCTTTTTTCATCATCACATGCATCGCCCTAATATGGCTCCATCGTGGACTCAATTTGTTGCACCTGTAGGATATGCTAATCCTTCATTTGGTGTTGCTGGTCTTGGCAGTGCTGTCCTAATGAAAAATAACAATATTCACTATGATAGGAATAACTATCAAACTTCATCTTCACTCCCTGATTTATCTCTCACCCTCTAG 561 0.3761 MKFVNGDNKRKLKRKMEEISKPHSCAADSEVSLSLTLSLGERRSSFPFKSLKREYPCKFCNKKFLSSQALGGHQHAHRHERMLSRIDKLEFQMETLGLLSSHQVYPYSSISNLHQYEIDSPFFHHHMHRPNMAPSWTQFVAPVGYANPSFGVAGLGSAVLMKNNNIHYDRNNYQTSSSLPDLSLTL 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02142 186 PANTHER ZINC FINGER PROTEIN JAGGED 38 146 IPR045320 GO:0003700
Car04g02142 186 ProSitePatterns Zinc finger C2H2 type domain signature. 57 79 IPR013087 -
Car04g02142 186 Gene3D Classic Zinc Finger 37 103 - -
Car04g02142 186 ProSiteProfiles Zinc finger C2H2 type domain profile. 55 82 IPR013087 -
Car04g02142 186 PANTHER C2H2-TYPE ZINC FINGER PROTEIN 38 146 - -
Car04g02142 186 SUPERFAMILY beta-beta-alpha zinc fingers 53 82 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g02142 Car-Chr4 28558160 28558720 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g02142 17 130 C2H2 Transcription Factor Family AT1G24625 31.897 5.48e-11 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02142 - - cam:101505119 203.756