Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02141 ATGGAGGAAACAACAACACTTTCTTCTACAATTGATTCAGAAGTGTCACTGTCTCTGAGTTTAGGAATAGGTATATCTTATTCTCCATTCAAATTCCTTAAGAGCAATGAAGAGAATATAGAATACCCATGCAAGTTTTGCAACAAGAAATTTTCGAGTTCTCAAGCTTTAGGAGGACACCAAAACGCGCATAGACGCGAAAGGGTGATATCAAAAATAGAAAAAGAGTTTCAAATGGGAACTTTTGGACTACTTGGTCCCCATCAATTATGTTCATATTCACCCATTCTAAATCATCATCAATATGCAGTTGGGTCACCATTTTTTCATCATCAAATGCATTATCCCAATGTGGCTCCATCATGGACTCAATTTGTTGCACCTATAGGATATGCTAACCCATTTGGGATGATGAACAACTCTTTGGGTACTCCAACTACTCCACAAAATAATAATGATAATATTCACTATGTTGATGATAACCGCCAAATTTCATCCTCATTTCCTCATTTGTTCCTCAACCACTAG 528 0.3674 MEETTTLSSTIDSEVSLSLSLGIGISYSPFKFLKSNEENIEYPCKFCNKKFSSSQALGGHQNAHRRERVISKIEKEFQMGTFGLLGPHQLCSYSPILNHHQYAVGSPFFHHQMHYPNVAPSWTQFVAPIGYANPFGMMNNSLGTPTTPQNNNDNIHYVDDNRQISSSFPHLFLNH 175
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Car04g02141 175 ProSitePatterns Zinc finger C2H2 type domain signature. 44 64 IPR013087 -
Car04g02141 175 ProSiteProfiles Zinc finger C2H2 type domain profile. 42 69 IPR013087 -
Car04g02141 175 SUPERFAMILY beta-beta-alpha zinc fingers 41 69 IPR036236 -
Car04g02141 175 PANTHER ZINC FINGER PROTEIN JAGGED 9 166 IPR045320 GO:0003700
Car04g02141 175 Pfam C2H2-type zinc finger 42 67 - -
Car04g02141 175 Gene3D Classic Zinc Finger 29 81 - -
Car04g02141 175 PANTHER C2H2-TYPE ZINC FINGER PROTEIN 9 166 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Car04g02141 Car-Chr4 28547132 28547659 Dispersed/Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g02141 38 77 C2H2 Transcription Factor Family AT5G05120 60.000 1.29e-11 58.9
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Car04g02141 zf-C2H2_6 7.4e-07 CL0361
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02141 - - cam:101505119 359.762