Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car04g02141 | ATGGAGGAAACAACAACACTTTCTTCTACAATTGATTCAGAAGTGTCACTGTCTCTGAGTTTAGGAATAGGTATATCTTATTCTCCATTCAAATTCCTTAAGAGCAATGAAGAGAATATAGAATACCCATGCAAGTTTTGCAACAAGAAATTTTCGAGTTCTCAAGCTTTAGGAGGACACCAAAACGCGCATAGACGCGAAAGGGTGATATCAAAAATAGAAAAAGAGTTTCAAATGGGAACTTTTGGACTACTTGGTCCCCATCAATTATGTTCATATTCACCCATTCTAAATCATCATCAATATGCAGTTGGGTCACCATTTTTTCATCATCAAATGCATTATCCCAATGTGGCTCCATCATGGACTCAATTTGTTGCACCTATAGGATATGCTAACCCATTTGGGATGATGAACAACTCTTTGGGTACTCCAACTACTCCACAAAATAATAATGATAATATTCACTATGTTGATGATAACCGCCAAATTTCATCCTCATTTCCTCATTTGTTCCTCAACCACTAG | 528 | 0.3674 | MEETTTLSSTIDSEVSLSLSLGIGISYSPFKFLKSNEENIEYPCKFCNKKFSSSQALGGHQNAHRRERVISKIEKEFQMGTFGLLGPHQLCSYSPILNHHQYAVGSPFFHHQMHYPNVAPSWTQFVAPIGYANPFGMMNNSLGTPTTPQNNNDNIHYVDDNRQISSSFPHLFLNH | 175 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car04g02141 | 175 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 44 | 64 | IPR013087 | - | |
Car04g02141 | 175 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 42 | 69 | IPR013087 | - | |
Car04g02141 | 175 | SUPERFAMILY | beta-beta-alpha zinc fingers | 41 | 69 | IPR036236 | - | |
Car04g02141 | 175 | PANTHER | ZINC FINGER PROTEIN JAGGED | 9 | 166 | IPR045320 | GO:0003700 | |
Car04g02141 | 175 | Pfam | C2H2-type zinc finger | 42 | 67 | - | - | |
Car04g02141 | 175 | Gene3D | Classic Zinc Finger | 29 | 81 | - | - | |
Car04g02141 | 175 | PANTHER | C2H2-TYPE ZINC FINGER PROTEIN | 9 | 166 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Car04g02141 | Car-Chr4 | 28547132 | 28547659 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Car04g02141 | 38 | 77 | C2H2 Transcription Factor Family | AT5G05120 | 60.000 | 1.29e-11 | 58.9 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2H2 | Car04g02141 | zf-C2H2_6 | 7.4e-07 | CL0361 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car04g02141 | - | - | cam:101505119 | 359.762 |