Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02140 ATGGACAACAACAAAATCACTGAAAGAGAAACACATGACTTAATGAACGTTGAGTCTTTCTCTCAACTTCCCTTCATCCGCCCTCCACCAAAAGAAAAAGGCATCCGCCTCTTCGGTATCGAATTTGGCGGATCAGATGCCACCACCACAGACCACCACTCTGACTCACCAGAAACAACAACCAACAACATTAACACATTTGAAATTGTTGATGacaacaacaacattaacaacaacgagaacaacaacaacaatgaaaacaaTCGAAGATTCGAATGCCATTATTGTTGTAGAAATTTCCCGACTTCACAAGCTTTAGGAGGACACCAAAACGCACACAAAAGAGAAAGACAACACGCGAAACGCGCACACCTTCAATCAACTATGGTACATGCTACATCTTTCTCTGatccacatctttatcatcatcatcatcaacaacaacatcCATTCATAAACTATAGATTCAcatcatcatcatcatcatcattatcatcatcatcaATGGCTTCTTATCCAACATGGAACAACAACACAAACTCAAGTGCTGCTAGGTTTTATAACCACCACCCAAAttcttcttcttcttcatcttcttACTCTCAACCTATTAATGGTAGTCCGTTAGCTTTTTGGAGAATCCCAAACGGTGCCGTTCAGAGTAACCCTAGTTTCAACCATGAACGCTCTTTGCCTTTGCTTGCATCTGAGGAAAGGGGTATGCAAGTTGGACATGGAGTACCTTCAGCTTCTTCTTCGACGCAAAATCGCTATGTTTATGACGCTAAACGTAGTGACCATGTTAGTTTGGATCTTCATCTTTAA 825 0.3479 MDNNKITERETHDLMNVESFSQLPFIRPPPKEKGIRLFGIEFGGSDATTTDHHSDSPETTTNNINTFEIVDDNNNINNNENNNNNENNRRFECHYCCRNFPTSQALGGHQNAHKRERQHAKRAHLQSTMVHATSFSDPHLYHHHHQQQHPFINYRFTSSSSSSLSSSSMASYPTWNNNTNSSAARFYNHHPNSSSSSSSYSQPINGSPLAFWRIPNGAVQSNPSFNHERSLPLLASEERGMQVGHGVPSASSSTQNRYVYDAKRSDHVSLDLHL 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02140 274 Coils Coil 69 89 - -
Car04g02140 274 PANTHER ZINC FINGER PROTEIN GIS 1 274 IPR044291 GO:0003700|GO:0009739|GO:0010026|GO:0010090
Car04g02140 274 ProSitePatterns Zinc finger C2H2 type domain signature. 93 113 IPR013087 -
Car04g02140 274 ProSiteProfiles Zinc finger C2H2 type domain profile. 91 118 IPR013087 -
Car04g02140 274 SUPERFAMILY beta-beta-alpha zinc fingers 87 119 IPR036236 -
Car04g02140 274 PANTHER ZINC FINGER PROTEIN GIS 1 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g02140 Car-Chr4 28298530 28299876 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g02140 8 274 C2H2 Transcription Factor Family AT3G58070 39.583 1.03e-46 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02140 - - vun:114190818 257.684