Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02132 ATGGCAGTTCCACTCCGCTTGGCTTCTTCACGCTTTTTCTTCCCTAAACCCCTTCACATCTTCTCATTCTCATTTTCATTCTCCACCTCCTCACCATCACCACCTCCTATCCGAGTCTCCCTCACGGACTCAGTGGGTCGCGCGGTCTTCGCAACTCGCCCAATCCCATCCGGCTATCTCATCCACACCGCCCAGCCCGCCGTCTGCCACCCTTCACCTTCCGCCCTTCACCCAGTCTGCTACTCCTGCCTCTCCACACTCTCTCAACGCTCCCCCTTTTGTTCTCACCATTGCCACCAACGCTCTAAGGAATATTATGATGTTGAGATGAAAGCAAATTGGGAGGATTTTGATGACTATTGCCGGAACCGTGGTTTGAAATATCCCTTTTTGGTAAAGCGGTTGGCTTGCATGATCATATCAGGAGTTGCCAAAAGTGACAGTCTTGACATTCTTCAACCTGCCACTTTGACACCCGAGATGATTTTTGAGATGGAAGAGGGGTTCACCTTGCTAAGGAATGCCTTCACAAAGACACTTGTTTCGGATGAACAAATTGCTTTTTTAACCAAGCAATGGTACATTAGTGTTTTGGCACGAATTCGAATCAACGCATTTCGCATTGAGCTGGCTAGTGGATCATATGAAGATCTTCTTTCTTCAGCATTTGCATCTGTAGAAGCTGAAACTGCTGTTGGAAATGCTGTCTATATACTTCCTTCCTTCTACAATCATGATTATCCTAATGCACACATTATATGGATAGATAGTGCAGAGGCAAAATTGAAGGCCCTCCGTGACATTGATGAAGGTGAAGAAATGAGAATCTGCTATATTGATGCGAGTCTGAACCGCGATGCTCGGCGAGAACTATTGTTTCGAGGTTTTGGTTTTCAATGCAATTGCAGTAGGTGCTTGCATGGTGATTAG 930 0.4624 MAVPLRLASSRFFFPKPLHIFSFSFSFSTSSPSPPPIRVSLTDSVGRAVFATRPIPSGYLIHTAQPAVCHPSPSALHPVCYSCLSTLSQRSPFCSHHCHQRSKEYYDVEMKANWEDFDDYCRNRGLKYPFLVKRLACMIISGVAKSDSLDILQPATLTPEMIFEMEEGFTLLRNAFTKTLVSDEQIAFLTKQWYISVLARIRINAFRIELASGSYEDLLSSAFASVEAETAVGNAVYILPSFYNHDYPNAHIIWIDSAEAKLKALRDIDEGEEMRICYIDASLNRDARRELLFRGFGFQCNCSRCLHGD 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02132 309 Pfam SET domain 46 278 IPR001214 GO:0005515
Car04g02132 309 CDD SET_SMYD 219 305 - -
Car04g02132 309 SUPERFAMILY SET domain 34 303 IPR046341 -
Car04g02132 309 Gene3D - 121 205 - -
Car04g02132 309 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SMYD 43 306 - -
Car04g02132 309 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SMYD3 43 306 - -
Car04g02132 309 Gene3D SET domain 48 305 IPR046341 -
Car04g02132 309 ProSiteProfiles SET domain profile. 35 279 IPR001214 GO:0005515
Car04g02132 309 Gene3D - 79 120 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Car04g02132 SET 1.8e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02132 - - lja:Lj0g3v0252639.2 506.523