Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02113 ATGGGTAACAACTGTGTAGGACCAAACCTCGGCGGCACTGGCTTCCTTCAATCCGTTACGGCCGCCGTATGGAAAACTCGCCCACCGGAGCCTAGGCTTCCTCCTCCTAACGCCGATGACAAGGACAAACCTCCGTCGCCGCCGAATGTTTCTACTGATTCCACCAAAGGAGACTCGAGTTCCGCCGGAACAGGTTCTGataataataataataataataacaataataatCCTCCGATGTCGGTTCAGAGCACGCCGCCTGAACAGGTGAAAATAACTGCGGCGGAAACAAATCCGCTTCCGGTTCAGGCTGAACCGGAGAAGCCGGTTAAACCAGAGGTAAATAATGCACCAGCATCTAGCACtgctggtgatggtggtggtggtggtgagggtgatgCAGGGAAAGCTAAGAAACCTACTCATGTGAAAAGGGTATCAAGTGTTGGACTTCAGGTAGAATCTGTATTGGGTAGAAAAACAGAGAACATAAAGGAATTTTATAGTTTGGGGAGGAAATTAGGTCAAGGGCAATTTGGTACAACATTTTTATGTATGGAAAAAGGGACTAACAAGGAATTTGCATGCAAATCAATTGCAAAGAGGAAATTAACAACACAAGATGATGTTGAGGATGTTAGAAGGGAGATTCAGATAATGCATCACTTGGCTGGTCACCCAAATGTCATACAAATAGTTGGTGCTTATGAGGATGCTGTTGCTGTTCATGTTGTTATGGAGTTGTGTGCTGGTGGGGAACTTTTTGACAGGATCATTCAGAGAGGACATTATACTGAGAGAAAAGCTGCTGAACTTGCTAGGTTGATTTTAGGTGTTGTTCAGGCTTGTCATTCTTTAGGTGTTATGCATAGAGACTTGAAGCCTGAGAATTTTCTATTTGTTAACCATGAAGAAGAATCACCACTTAAGACAATTGATTTTGGACTCTCTATGTTTTTTAGACCAGGTGAAACATTTACTGATGTGGTTGGGAGCCCATACTATGTGGCCCCTGAAGTTTTGAGGAAGAACTATGGTCAAGAATGTGATATTTGGAGTGCTGGGGTGATCATTTACATTTTACTCAGTGGAGTTCCCCCATTTTGGGATGAATCGGAACAAGGAATATTTGAGCAAGTATTGAAAGGAGAGCTTGACTTTATTTCTGAACCATGGCCCAGCATATCTGAAAGTGCAAAGGATCTTGTTCGAAGAATGCTTATAAGGGACCCTAAGAAGCGGTTGACGGCACATGAAGTTCTTTGCCATCCTTGGGTTCAGGTTGGAGGTGTTGCTCCTGATAAACCACTTGATTCTGCTGTTTTATCTCGATTGAAGCAATTCTCTGCAATGAACAAGCTCAAGAAAATTGCAATTCGAGTAATTGCTGAAAATCTGTCCGAAGAGGAAATTGCAGGATTGAAAGAAATGTTCAAGATGATAGACACAGATAATAGCGGGCAAATCACTCTTGAGGAACTGAAAAATGGTTTAGAGAGAGTGGGTTCTGTTCTTAAGGATTCTGAAATTAACTGGTTAATGCAAGCGGCAGACATTGATAATAGTGGTACCATAGATTATGGTGAATTCATAGCAGCTATGCTTCATCTAAACCAGGTTCAGAAGGAGGATCATCTATTTGCAGCCTTTTCCTACTTTGACAAAGATGGGAGTGGATACATTACAAAGGATGAGCTTCAACAAGCCTGTCAACAGTTTGGCCTACAAGACGATCATCTAGATGATGTAATACGTGAAGCTGATCGGGATAATGATGGACGAATTGATTACAGTGAATTTGTTGCAATGATGCAAGACACTGGTTTTGGCAAAAAGGGGCCACAAACAGCATGA 1854 0.4121 MGNNCVGPNLGGTGFLQSVTAAVWKTRPPEPRLPPPNADDKDKPPSPPNVSTDSTKGDSSSAGTGSDNNNNNNNNNNPPMSVQSTPPEQVKITAAETNPLPVQAEPEKPVKPEVNNAPASSTAGDGGGGGEGDAGKAKKPTHVKRVSSVGLQVESVLGRKTENIKEFYSLGRKLGQGQFGTTFLCMEKGTNKEFACKSIAKRKLTTQDDVEDVRREIQIMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAAELARLILGVVQACHSLGVMHRDLKPENFLFVNHEEESPLKTIDFGLSMFFRPGETFTDVVGSPYYVAPEVLRKNYGQECDIWSAGVIIYILLSGVPPFWDESEQGIFEQVLKGELDFISEPWPSISESAKDLVRRMLIRDPKKRLTAHEVLCHPWVQVGGVAPDKPLDSAVLSRLKQFSAMNKLKKIAIRVIAENLSEEEIAGLKEMFKMIDTDNSGQITLEELKNGLERVGSVLKDSEINWLMQAADIDNSGTIDYGEFIAAMLHLNQVQKEDHLFAAFSYFDKDGSGYITKDELQQACQQFGLQDDHLDDVIREADRDNDGRIDYSEFVAMMQDTGFGKKGPQTA 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02113 617 ProSiteProfiles EF-hand calcium-binding domain profile. 505 540 IPR002048 GO:0005509
Car04g02113 617 MobiDBLite consensus disorder prediction 47 87 - -
Car04g02113 617 SUPERFAMILY Protein kinase-like (PK-like) 167 427 IPR011009 -
Car04g02113 617 Pfam Protein kinase domain 168 426 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g02113 617 SMART serkin_6 168 426 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g02113 617 ProSiteProfiles EF-hand calcium-binding domain profile. 469 504 IPR002048 GO:0005509
Car04g02113 617 ProSiteProfiles EF-hand calcium-binding domain profile. 541 576 IPR002048 GO:0005509
Car04g02113 617 SMART efh_1 579 607 IPR002048 GO:0005509
Car04g02113 617 SMART efh_1 473 501 IPR002048 GO:0005509
Car04g02113 617 SMART efh_1 509 537 IPR002048 GO:0005509
Car04g02113 617 SMART efh_1 545 573 IPR002048 GO:0005509
Car04g02113 617 MobiDBLite consensus disorder prediction 21 87 - -
Car04g02113 617 ProSitePatterns Protein kinases ATP-binding region signature. 174 201 IPR017441 GO:0005524
Car04g02113 617 ProSitePatterns EF-hand calcium-binding domain. 554 566 IPR018247 -
Car04g02113 617 Gene3D Phosphorylase Kinase; domain 1 170 253 - -
Car04g02113 617 Pfam EF-hand domain pair 474 534 IPR002048 GO:0005509
Car04g02113 617 Pfam EF-hand domain pair 544 605 IPR002048 GO:0005509
Car04g02113 617 PANTHER SERINE/THREONINE-PROTEIN KINASE 94 609 - -
Car04g02113 617 ProSitePatterns Serine/Threonine protein kinases active-site signature. 288 300 IPR008271 GO:0004672|GO:0006468
Car04g02113 617 ProSiteProfiles EF-hand calcium-binding domain profile. 577 610 IPR002048 GO:0005509
Car04g02113 617 CDD STKc_CAMK 167 425 - -
Car04g02113 617 ProSitePatterns EF-hand calcium-binding domain. 518 530 IPR018247 -
Car04g02113 617 SUPERFAMILY EF-hand 465 605 IPR011992 -
Car04g02113 617 Gene3D Transferase(Phosphotransferase) domain 1 254 430 - -
Car04g02113 617 MobiDBLite consensus disorder prediction 102 146 - -
Car04g02113 617 ProSitePatterns EF-hand calcium-binding domain. 588 600 IPR018247 -
Car04g02113 617 Gene3D - 433 607 - -
Car04g02113 617 ProSitePatterns EF-hand calcium-binding domain. 482 494 IPR018247 -
Car04g02113 617 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 2 94 609 - -
Car04g02113 617 ProSiteProfiles Protein kinase domain profile. 168 426 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g02113 Car-Chr4 27449817 27454289 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g02113 1 617 EF-hand Containing Proteins AT2G38910 71.613 0.0 902
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Car04g02113 Pkinase 3.6e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02113 K13412 - gmx:100813232 976.467
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g02113 04 27449817 27454289 Car04g02113 04 27449817 27454289 ECH