Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02111 ATGTCTGTTGCAGCTGAAGATATTGAAGCTGGAACAAGGACAAAGACAAAGTTTCAAACAGAACCTACTCTGCCTATATATCTAAAGTTCACTGATGTGACCTACAAAGTAGTGGTGAAAGGCATGACATCAAGTGAGGAGAAGGATATATTGAATGGCATAAGTGGTTCTGTAAATCCAGGTGAAGTTTTGGCTTTGATGGGTCCCTCAGGAAGTGGAAAGACAACTCTTTTAAATCTCCTTGGAGGGAGGCTAAGTAAGACAACAATTGGTGGCTCTATCACTTACAATGACCAATCATATTCCAAGTTCCTCAAAAGCAGGATAGGATTTGTGACACAAGATGATGTCTTGTTTCCTCACCTAACTGTGAAAGAGACATTGACATACGCAGCGCGGTTAAGACTTCCAAATACATTAACTAAGGAGCAAAAGGAAAAAAGAGCTTTAGATGTCATCTATGAGCTTGGCTTGGAGAGGTGCCAAGATACCATGATCGGTGGTTCATTTGTTCGCGGAGTATCAGGTGGAGAGAGGAAGAGAGTTTGTATTGGTAATGAGATTATAATCAACCCTTCCATTCTGTTTCTTGATGAACCAACATCTGGTTTGGATTCAACAACAGCCTTGAAGATTGTTCAGATGCTGCAAGACATAGCAGAGGCTGGTAAAACAGTAGTGACAACAATTCACCAACCATCAAGTAGACTCTTCCACAAATTTGACAAGTTGATCCTTCTTGGGAAAGGGAGCTTACTTTACTTTGGAAAAGCAGCAGAAGCAATGAATTATTTCCAATCAATAGGATGTTCACCACTTATTTCCATGAATCCAGCAGAGTTTTTGCTAGACCTTGCTAATGGAAACATAAATGATGTTTCTGTACCATCAGAGTTGGATGATAAAGTGCAAATGGGAAATGCAGAAGTTGAAACAACATATAATGGAAAACCATCACCAGCAGTAGTCCATGAGTATCTGGTGGAGGCATATGAATCTCGAGTTGCGGAAACAGAGAAGAAAAAGATAATGGTTTCTGTACCTCTAGATGAAAATTTGAAGGCCAAAGTATGTTCTCCTAAAAGACAATGGGGAGCAAGTTGGGATGAACAATATTCCATACTTTTCTGGAGAGGAATCAAGGAAAGGAGGCATGACTATTTTAGCTGGTTGAGAATCACACAAGTTTTATCCACTGCAGTCATCTTAGGATTACTTTGGTGGCAATCAGATGCTAAGAACCCAAAAGATCTGCAAGATCAGGCAGGACTACTTTTCTTTATTGCCGTCTTCTGGGGATTCTTTCCAGTTTTTACAGCAATATTTACATTTCCTCAAGAAAGAGCCATGCTAACTAAAGAACGTGCCGCTGATATGTACAGATTAAGTGCATACTTCCTGGCTAGAACTACAAGTGACCTTCCATTAGACCTGATATTACCGGTGCTTTTTATCCTCGTTGTTTATTTCATGGCTGGTTTGAGATTAAGTGTTGCCCCCTTTTTCCTCACTATTGTTACTGTCTTCCTCTGCATCGTTGCGGCTCAGGGTCTTGGACTCGCCATCGGTGCTACGCTTATGGACTTGAAAAGAGCAACAACTTTGGCTTCGGTAACTGTGATGACTTTCATGCTGGCCGGAGGATTTTTCGTTCAGAAAGTTCCCATATTCATTTCTTGGATCCGCTACATGTCTTTCAACTACCACACTTACAAATTGTTGCTCAAGGTGCAATATGAACATCTCAGTCCAAGCATAAATGGAGTCAAAATTGACAGTGGTTTGACAGAAGTAGCTGCTCTGGTTGCCATGGTTTTCGCTTACCGTTTCTTGGCGTATCTTTCTTTGCGGAGAATGAAACTTCAAACCGGAAGTTAA 1878 0.4089 MSVAAEDIEAGTRTKTKFQTEPTLPIYLKFTDVTYKVVVKGMTSSEEKDILNGISGSVNPGEVLALMGPSGSGKTTLLNLLGGRLSKTTIGGSITYNDQSYSKFLKSRIGFVTQDDVLFPHLTVKETLTYAARLRLPNTLTKEQKEKRALDVIYELGLERCQDTMIGGSFVRGVSGGERKRVCIGNEIIINPSILFLDEPTSGLDSTTALKIVQMLQDIAEAGKTVVTTIHQPSSRLFHKFDKLILLGKGSLLYFGKAAEAMNYFQSIGCSPLISMNPAEFLLDLANGNINDVSVPSELDDKVQMGNAEVETTYNGKPSPAVVHEYLVEAYESRVAETEKKKIMVSVPLDENLKAKVCSPKRQWGASWDEQYSILFWRGIKERRHDYFSWLRITQVLSTAVILGLLWWQSDAKNPKDLQDQAGLLFFIAVFWGFFPVFTAIFTFPQERAMLTKERAADMYRLSAYFLARTTSDLPLDLILPVLFILVVYFMAGLRLSVAPFFLTIVTVFLCIVAAQGLGLAIGATLMDLKRATTLASVTVMTFMLAGGFFVQKVPIFISWIRYMSFNYHTYKLLLKVQYEHLSPSINGVKIDSGLTEVAALVAMVFAYRFLAYLSLRRMKLQTGS 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02111 625 ProSitePatterns ABC transporters family signature. 174 188 IPR017871 GO:0005524
Car04g02111 625 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 5 619 - -
Car04g02111 625 PANTHER PIGMENT PERMEASE, P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASE-RELATED 5 619 - -
Car04g02111 625 Gene3D - 27 268 IPR027417 -
Car04g02111 625 Pfam ABC transporter 51 202 IPR003439 GO:0005524
Car04g02111 625 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 30 266 IPR027417 -
Car04g02111 625 SMART AAA_5 60 251 IPR003593 -
Car04g02111 625 Pfam ABC-2 type transporter 370 579 IPR013525 GO:0016020|GO:0140359
Car04g02111 625 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 28 274 IPR003439 GO:0005524
Car04g02111 625 CDD ABCG_EPDR 25 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g02111 Car-Chr4 27375295 27381446 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g02111 26 318 Calmodulin-binding Proteins AT2G36910 27.425 2.29e-16 81.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g02111 04 27375295 27381446 Car04g02111 04 27375295 27381446 ECH
Car03g02694 03 72635630 72645464 Car04g02111 04 27375295 27381446 PCT