Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02095 ATGAACAATACAACCGATGGATTCTTTGGTTCCAATGACATAAGTGGATTTGGCTATGGTATAGGAATTTCAATTGGGATTCTTTTGCTCATAACAACAATCACACTCACTTCCTATTTTTGCACAAGGTCACAACTTCCAAATGCTCCAAATCCAAGAAGAAGGAACAATACTACCACCCCTGAATTTCTTGAGCCACAACATTCAATAGTTGATTTGGGATTAGAGGAATCAACAATTATGAGTTATCCAAAGATGTTATATAGTGAAGTGAAGCTTAGAAAATCTAATAATTCTACATCAACATGTTGTTCTATATGTTTGGGTGATTATAAGGGAAATGATATGCTTAGGGTGTTACCGGATTGTGAACATTTATTTCATCTTAAGTGTATTGATCCTTGGTTGAGGATGCATCCTACTTGTCCTCTTTGTAGAAGTACTTCTCCAATTCCAACACCTCTTTCAACACCTTTGGCTGAAGTTGTTCCATTGGCAACAAGAAGAGATTCATAG 516 0.3624 MNNTTDGFFGSNDISGFGYGIGISIGILLLITTITLTSYFCTRSQLPNAPNPRRRNNTTTPEFLEPQHSIVDLGLEESTIMSYPKMLYSEVKLRKSNNSTSTCCSICLGDYKGNDMLRVLPDCEHLFHLKCIDPWLRMHPTCPLCRSTSPIPTPLSTPLAEVVPLATRRDS 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02095 171 SUPERFAMILY RING/U-box 80 153 - -
Car04g02095 171 SMART ring_2 104 145 IPR001841 -
Car04g02095 171 PANTHER RING-H2 FINGER PROTEIN ATL70-LIKE 2 169 - -
Car04g02095 171 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 2 169 IPR045899 -
Car04g02095 171 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 63 151 IPR013083 -
Car04g02095 171 CDD RING-H2_PA-TM-RING 103 146 - -
Car04g02095 171 Pfam Ring finger domain 104 146 IPR001841 -
Car04g02095 171 ProSiteProfiles Zinc finger RING-type profile. 104 146 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g02095 Car-Chr4 27106792 27107702 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g02095 6 167 C3H Transcription Factor Family AT2G35910 61.728 2.57e-59 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02095 - - gmx:100796149 232.646