Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02088 ATGGCGAATCTCCCCCTTCCATCAATCTCCATGAAGAATAAAGAATCAAGTAACGCTTCAGAAAGGATATTGCATGCTGAACGCCTTATTACTCAATTGAGCAATCCCAATCTCCGAGAAAATGCTCTTTCTGTGCTCTCGAAGATGACAGATATATTTCAAGATCTGGCACCATTGTTGTGGAATTCTTTTGGCACTATTGCAACACTTTTACAGGAAATGGTTTCAATATATCCTGATCTTTCACCACCAAATCTAACTTCTGCACAATCAAATCGAGTATGCAATGCTCTTGCACTACTTCAGTTTTTAATTATTTACACTTACGTTTTCTTATCTGCAGCTAACATGCCTCTGTATGTGTATCCGTTTCTTCATACGACAAGCTTGTCAGAACCATTTGAGCATTTGAGGCTTGCCAGTCTTGGAGTCATTGCTGCCTTGGTGAAGGTTAAAACCAAAGAAGTAATAGGTTTTCTTCTCTCAAGTGAAGTAATGCCACTCTGCCTTCACAATATGGAAATCGGCAAAGAATTATCAAAAACGGTTGCAACTTTTATAGTTGAGAAAATTATTTCGGAAGTTGAAGGTTTGGCTTATGTTTGTGCTACACCAGATCGCTATAATGCAATTGGTCGAGCTTTGGACATTGTGTTGGCAAGTAATAATAAGCAACCATCACCTCGTCTTTTGAAGGTTATAATTCCATGTTATGATCGTCTGTCTGGTAAAAGGGTTGGTTGA 744 0.3871 MANLPLPSISMKNKESSNASERILHAERLITQLSNPNLRENALSVLSKMTDIFQDLAPLLWNSFGTIATLLQEMVSIYPDLSPPNLTSAQSNRVCNALALLQFLIIYTYVFLSAANMPLYVYPFLHTTSLSEPFEHLRLASLGVIAALVKVKTKEVIGFLLSSEVMPLCLHNMEIGKELSKTVATFIVEKIISEVEGLAYVCATPDRYNAIGRALDIVLASNNKQPSPRLLKVIIPCYDRLSGKRVG 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02088 247 PANTHER UNCHARACTERIZED 14 243 - -
Car04g02088 247 Gene3D - 20 247 IPR011989 -
Car04g02088 247 PANTHER BNAA05G20110D PROTEIN 14 243 - -
Car04g02088 247 SUPERFAMILY ARM repeat 34 193 IPR016024 -
Car04g02088 247 Pfam Cell differentiation family, Rcd1-like 29 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g02088 Car-Chr4 26920305 26934705 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Rcd1-like Car04g02088 Rcd1 2e-82 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02088 K12606 - thj:104817897 276.559