Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02080 ATGGCAACGTACTTTCATAATAATTCAGAAATTCAAGGAGGTTCAGCTGACGGCCTTCAAACTCTCATATTCATGAACCCATCAGGCTACATCAATTACTCCGACACGCCGCCGCAACAATCGCAACATGCCGGAAACCTCGTATTCCTCAACTCAGCCGCCAACACCTCAATTCATCAACAGAATCTCTCTCACGCGCCACCACAATTCGTGGGGGTCCCACTCACGGCAGAGCAATCAGTACAAGCCCATCACGACATATCCGCCTTGCATGGCTTCCCACCGCGCATGCAGTACAACATGTGGAACGCGGCGGATCCAAATTCAGCGGCGCGTGAGTCCACACGCGCTACTCAGGGACTGTCTTTGAGCTTGCACGCTCAGGGGTCGGGCGAGGAGGCGCGTGTTTCTAATGGTGGGTCGTGTTCCTCTGCTTCGAACGGTGTTTCGGGGATTCAGAGTGTGTTGTTGAGTTCGAAATATTTGAAGGCAACACAGGAATTACTTGATGAGGTTGTTAATGTTAATGGTGGAATAAAGGTTGAAATTTCGAAGAAGAGTTTTGAGAAAAATAAGGTTGTTGGTGAATCATCAACTGGTGTTAGTGGAGATGGTGGTTCTGTTGGTGGTGATGGAAGTGGGAAGCGTAGCTCTGAGTTATCAACAACTGAGAGACAAGAAATTCAGATGAAGAAAGCCAAGCTAATTAACATGCTTGATGAGGTGGAGCAAAGGTACAGACAATATCACAACCAAATGCAGATGGTAATTTCCTCATTTGAGCAAGTTGCAGGGATTGGCTCAGCAAGAACCTACACTGCACTTGCACTACAAACAATATCCAAGCAATTTCGTTGCTTAAAAGATGCAATTACTGGCCAAATTAGAACAGCAAATAAGAGCTTAGGTGAAGATGATAGCTTTGGAGGCAAAATTGAAGGGTCAAGGCTTAAATATGTTGATCATCATCTAAGGCAACAAAGAGCAATTCAACAATTAGGAATGATCCATCATAATGCTTGGAGACCTCAAAGAGGATTGCCTGAAAGATCCGTTTCGGTTCTTCGGGCGTGGCTTTTTGAACACTTCCTTCACCCGTATCCCAAGGATTCAGACAAACAAATGCTTGCAAAACAAACAGGGCTTACTAGGAGCCAGGTTTCAAATTGGTTCATAAATGCAAGAGTTAGACTTTGGAAGCCAATGGTGGAAGAAATGTACATGGAAGAAATGAAGGAGCAAGAGTTGAATGGTTCAGAGGACAACAAATCAAACAAGAGTACTGAAGAAGACCCTTCAACAAAAACAACACAAGACAGAGTTCCAACCTCAGAAACAGAATCTAAAAGAAGTTTCAATTCCAAACAAGACATAACCACCAAGAACCAAAACATTAATCCTATAGTTTCAATTGCAACACCAACAACATCACCAATTGGTAACAACAATGTTAGAAACAATTCGTCCTCAGGATTTAGCTTCATCGGTTCATCGTCGGAACTCGATGGAATAACAACAACACAAGGAAGTCCAAAGAGAACAAGGAACCATGAAATTCTTCAATCTCATCATAATAATGTTTTGAAGTCATCCAATGAAACAACAAATAATGGACAACAAATTGTTTCAATGAAATTTGTTGGTGGTGGTGATGAAAGAGAAAGTAGAGATGGTTATTGTTTCATGGGGAACCAAACTAATTTCATTGCTGGTTTTGGTCAATACCCAATGGAAGAAATTGGAAGATTTGATGAAGAAAATTTTACACCAAGGTTTTCAGGTAATAATAATAATAATGGTGTTTCACTCACTCTTGGTCTTCCACATCAAAGTTTTATGCCAAATGAGAATATTCAATTAGGAAGGAGATTGGAGATTAGTGAAAATAATGAGTTTGGTGCTTTAAACAATTCAAATTCTCACTCTTCAGCTGCATTTGAGAGTATCAACATGCAGAATCCAAAGAGGTTTGCTGCACAATTGTTGCCTGATTTTGTGGCATAA 2004 0.4132 MATYFHNNSEIQGGSADGLQTLIFMNPSGYINYSDTPPQQSQHAGNLVFLNSAANTSIHQQNLSHAPPQFVGVPLTAEQSVQAHHDISALHGFPPRMQYNMWNAADPNSAARESTRATQGLSLSLHAQGSGEEARVSNGGSCSSASNGVSGIQSVLLSSKYLKATQELLDEVVNVNGGIKVEISKKSFEKNKVVGESSTGVSGDGGSVGGDGSGKRSSELSTTERQEIQMKKAKLINMLDEVEQRYRQYHNQMQMVISSFEQVAGIGSARTYTALALQTISKQFRCLKDAITGQIRTANKSLGEDDSFGGKIEGSRLKYVDHHLRQQRAIQQLGMIHHNAWRPQRGLPERSVSVLRAWLFEHFLHPYPKDSDKQMLAKQTGLTRSQVSNWFINARVRLWKPMVEEMYMEEMKEQELNGSEDNKSNKSTEEDPSTKTTQDRVPTSETESKRSFNSKQDITTKNQNINPIVSIATPTTSPIGNNNVRNNSSSGFSFIGSSSELDGITTTQGSPKRTRNHEILQSHHNNVLKSSNETTNNGQQIVSMKFVGGGDERESRDGYCFMGNQTNFIAGFGQYPMEEIGRFDEENFTPRFSGNNNNNGVSLTLGLPHQSFMPNENIQLGRRLEISENNEFGALNNSNSHSSAAFESINMQNPKRFAAQLLPDFVA 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02080 667 MobiDBLite consensus disorder prediction 455 484 - -
Car04g02080 667 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 5 6 624 - -
Car04g02080 667 SMART HOX_1 341 405 IPR001356 GO:0003677
Car04g02080 667 Coils Coil 225 252 - -
Car04g02080 667 Pfam Homeobox KN domain 358 397 IPR008422 GO:0003677|GO:0006355
Car04g02080 667 MobiDBLite consensus disorder prediction 126 146 - -
Car04g02080 667 CDD homeodomain 341 401 IPR001356 GO:0003677
Car04g02080 667 Gene3D - 337 415 - -
Car04g02080 667 SMART prehox3 150 293 IPR006563 -
Car04g02080 667 MobiDBLite consensus disorder prediction 195 226 - -
Car04g02080 667 MobiDBLite consensus disorder prediction 413 484 - -
Car04g02080 667 MobiDBLite consensus disorder prediction 413 454 - -
Car04g02080 667 Pfam Associated with HOX 155 292 IPR006563 -
Car04g02080 667 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 6 624 - -
Car04g02080 667 ProSiteProfiles 'Homeobox' domain profile. 338 401 IPR001356 GO:0003677
Car04g02080 667 SUPERFAMILY Homeodomain-like 342 408 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g02080 Car-Chr4 26624500 26629565 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g02080 1 667 Homeobox Transcription Factor Family AT2G35940 49.402 0.0 534
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Car04g02080 POX 2.7e-50 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02080 - - gmx:100810851 887.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02669 03 72450475 72455845 Car04g02080 04 26624500 26629565 PCT