Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02069 ATGGCAGTGGCACAACCCAACAACCGCAGTAGAAGATGTTGTTGCTGCCTCTTCAACATAATTTGGAAGCTCCTAATAGCAATCATAATCCTCGTTGTTCTCATAATCCTCATTATTTGGCTAATCGTTCAACCACGCGCTTTCAAATTCAGTGTCAAAGAAGCCAAACTCACGCAATTCAACTACCTTAACAACAACAACACCCTCCGTTACAACCTCGTACTCAACTTCACGGCTCGTAACCCAAACAAAAAACTCAACATCTACTACGATAAAGTGGAGGGACACGTGTCGTACGATGGAACAAGGTTCGCTTCAACGGACGTTATAACGTGGTTAAATTCATTTCGTCAATACACGAAAAGTACGAACAGTATGAACGGCGTTTTTTCCGGGAAACGTGTTGTGGTTTTCGATCAAAATATGGGTTCTGATTTTGAACGGGATAAGAAAGATGGGATTTTTCGGATTGATGTGAAACTATACTTTACGATTAGGTTCAGGCTTGGTGATTTTATTGGTGGGTATACTAAGGGGAATATTAAATGTGGACTTGATGTTCCGTTTGGTTCTAATGGGACAAAGGTCTTTAATGTGTTTGAACCCACCACGTGCGACGTTACTTTTTGA 630 0.4111 MAVAQPNNRSRRCCCCLFNIIWKLLIAIIILVVLIILIIWLIVQPRAFKFSVKEAKLTQFNYLNNNNTLRYNLVLNFTARNPNKKLNIYYDKVEGHVSYDGTRFASTDVITWLNSFRQYTKSTNSMNGVFSGKRVVVFDQNMGSDFERDKKDGIFRIDVKLYFTIRFRLGDFIGGYTKGNIKCGLDVPFGSNGTKVFNVFEPTTCDVTF 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02069 209 Pfam Late embryogenesis abundant protein 77 173 IPR004864 -
Car04g02069 209 PANTHER OS05G0367900 PROTEIN 7 207 IPR044839 GO:0098542
Car04g02069 209 PANTHER PROTEIN, PUTATIVE-RELATED 7 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g02069 Car-Chr4 26362830 26363709 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g02069 42 194 SNARE and Associated Proteins AT1G32270 32.911 1.47e-18 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02069 - - gmx:100788062 239.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g02069 04 26362830 26363709 Car04g02069 04 26362830 26363709 ECH
Car03g02657 03 72334841 72335521 Car04g02069 04 26362830 26363709 PCT