Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02056 ATGAAGTTTCTTTCTCTTTTCAAAAACACAGATGGAAAAAATTCTTCTTCATTGTCATGGGCTTGGCCATCTTGTAATAACCAACCTAAAACCCTTTCTTTCAGAGCCAACAAAAACGACGTCGTATCCAACAACGTTCTAGAAACCTCCAAATCCCAATCAACCGAATTTGCTTTCGAGGATTCAATCGAAACAGTTATTCGTGGTTTTCGTTCAGATAGACTTTTCTTCGAACCAAACGAAACAAGCTCAATTCTAAACACCAAACCAAATAATTCAACCGGTGAAAGTGAAATAGTTACCGCTagtaacagtaacatttacagtaacactaacggttacggtaaTGGCTTGTTATTAGCATACGAAAATACCTTGGCGGTTACGACGAAATCACGAAACCCATACGAAGATTTCAAAAAATCGATGGCAGAAATGGTAGAAGCTCACGGCGTTAACGATTGGGAAACTTTGGGAGAGCTTTTGAGTTGGTATTTGAAAATTAATGAGAAAAGCAATTACGACATTATTATTGATGCTTTTATTGATTTAGTTGTTGGTGCTTCTCCACCGTGTTCTGAATCTCACCATGCTTCACTGGATTCTTCTCCTTTATCGATTCATTCATGGACCACACCTTGTGTTTCGTCTTATAGTTCACCTTTGTGA 669 0.3587 MKFLSLFKNTDGKNSSSLSWAWPSCNNQPKTLSFRANKNDVVSNNVLETSKSQSTEFAFEDSIETVIRGFRSDRLFFEPNETSSILNTKPNNSTGESEIVTASNSNIYSNTNGYGNGLLLAYENTLAVTTKSRNPYEDFKKSMAEMVEAHGVNDWETLGELLSWYLKINEKSNYDIIIDAFIDLVVGASPPCSESHHASLDSSPLSIHSWTTPCVSSYSSPL 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02056 222 Pfam Transcriptional repressor, ovate 132 186 IPR006458 -
Car04g02056 222 ProSiteProfiles OVATE domain profile. 128 187 IPR006458 -
Car04g02056 222 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 1 221 IPR038933 GO:0045892
Car04g02056 222 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 127 186 IPR006458 -
Car04g02056 222 PANTHER OVATE TRANSCRIPTIONAL REPRESSOR 1 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g02056 Car-Chr4 26070690 26071358 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Car04g02056 Ovate 4.9e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02056 - - mtr:MTR_1g058000 228.794
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g02056 04 26070690 26071358 Car04g01601 04 16511087 16511879 ECH
Car04g02056 04 26070690 26071358 Car04g02056 04 26070690 26071358 ECH
Car03g02647 03 72263763 72264964 Car04g02056 04 26070690 26071358 PCT