Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02023 ATGCTAGGAAAAAAAATGGTATCATTGAAGAAACTAGCCAAGAAAGTGAAGGTTAGTAGTGGAGCTGATTCTAACACTAACCCTCATTACCATGAATGTTTGCTAAAGGGATATGAAGAAGAATCTTCCACAAACACAACACCAACTGGTTTTTTTGCACTTTATGTTGGGGAAGAACACCAAAGATATGTTGTTCCAACTAGCTATCTTTCTCACCCTTTATTCAAGATACTATTGGAGAAATCATACAATGAGTTTGGATTTCAGCAGAGGAATGGCTTGGTAGTTCCATGTAGTGTTTCCACATTTCAAGAGGTTGTAAATGCTATTGAATGCAACAATGGAAAGTTTGACTTAGGCAAGATTTTTCAAGATTTTGTTTGA 384 0.3594 MLGKKMVSLKKLAKKVKVSSGADSNTNPHYHECLLKGYEEESSTNTTPTGFFALYVGEEHQRYVVPTSYLSHPLFKILLEKSYNEFGFQQRNGLVVPCSVSTFQEVVNAIECNNGKFDLGKIFQDFV 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02023 127 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 1 127 IPR003676 GO:0009733
Car04g02023 127 Pfam Auxin responsive protein 11 109 IPR003676 GO:0009733
Car04g02023 127 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY 1 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g02023 Car-Chr4 24518688 24519373 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g02023 48 113 Calmodulin-binding Proteins AT5G20810 53.030 9.34e-21 81.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02023 K14488 - gmx:100790208 197.978
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g02023 04 24518688 24519373 Car04g02023 04 24518688 24519373 ECH