Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02015 ATGGATCTTGAAGAGCATTCTAGAACAGAGGAAAGTGACTTTGAATTGCTCAAGAAGGCTCTTACCATTGATAACCAGAAAGATAACAAACAAATGGCAAATGATTCAGAGGAAACAAAGTTGATGACTAGAAACAAATGGTCTGCTATAGTATATAGGCGAGCTGTTACGAATGATGGTGAATTTATTGCTGTCAAGAAGCTGAATTCGCGCGGAGGAGCATCGAGCATCGACCGAAGCATCTTAGCTGAGATTTCAACTCTTGGAAAGACCAGGCACATGAACATTGTGAAGTTGCATGAATTCTGTTTTCATGAAGATTCTAATCTTTTATCATAG 339 0.3894 MDLEEHSRTEESDFELLKKALTIDNQKDNKQMANDSEETKLMTRNKWSAIVYRRAVTNDGEFIAVKKLNSRGGASSIDRSILAEISTLGKTRHMNIVKLHEFCFHEDSNLLS 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02015 112 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 49 111 - -
Car04g02015 112 Gene3D Phosphorylase Kinase; domain 1 2 112 - -
Car04g02015 112 PANTHER RECEPTOR-LIKE PROTEIN 55 49 111 - -
Car04g02015 112 SUPERFAMILY Protein kinase-like (PK-like) 49 108 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g02015 Car-Chr4 24420934 24421778 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g02015 48 111 Receptor kinase-like Gene Family AT5G65700 43.750 3.44e-10 53.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Car04g02015 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02015 - - lja:Lj3g3v0999850.1 93.9745