Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02000 ATGAATCTCTGCTCCAAATGTTACGGTGATATTCGATTGAAGGAACAACAAGATGCTTCTACAAAATCAACAATCGAAAACGCTCTCTCTTCTTCCACCTCCGCCGTAGAATCCATCGCTTCTCCGCCGCTTTCCACATCGGAGCCAACCGTCGTTTCAATCGAATCGATCAATCCGTTGCCAGCTTTGACTGATGTTCCGTCGAGTTCTGTTACCGTTGTTCCGGTTTCTGTTTCGGCTCAACCGAACCGGTGCGTGACGTGTCGAAAACGCGTGGGGTTGACCGGGTTTAAGTGCAGGTGCGGGTCTACTTTTTGTGGGTCCCACAGGTACCCGGAGAGACACGGTTGTAGCTTTGATTTTAAGACGGTGGGGAGAGAGGAAATAGCTCGAGCGAACCCTTTGATCAGAGCGGAGAAGCTTCAGAAGATTTGA 435 0.4989 MNLCSKCYGDIRLKEQQDASTKSTIENALSSSTSAVESIASPPLSTSEPTVVSIESINPLPALTDVPSSSVTVVPVSVSAQPNRCVTCRKRVGLTGFKCRCGSTFCGSHRYPERHGCSFDFKTVGREEIARANPLIRAEKLQKI 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02000 144 SMART AN1_Zf_4 85 122 IPR000058 GO:0008270
Car04g02000 144 Gene3D - 65 140 IPR035896 -
Car04g02000 144 ProSiteProfiles Zinc finger AN1-type profile. 79 125 IPR000058 GO:0008270
Car04g02000 144 SUPERFAMILY AN1-like Zinc finger 78 139 IPR035896 -
Car04g02000 144 PANTHER AN1-TYPE ZINC FINGER PROTEIN 1 144 - -
Car04g02000 144 Pfam AN1-like Zinc finger 87 121 IPR000058 GO:0008270
Car04g02000 144 PANTHER BNAC06G14100D PROTEIN 1 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g02000 Car-Chr4 24168907 24169341 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g02000 1 144 C2H2 Transcription Factor Family AT3G52800 52.027 1.32e-38 127
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g02000 04 24168907 24169341 Car04g02000 04 24168907 24169341 ECH
Car03g02595 03 71844933 71847415 Car04g02000 04 24168907 24169341 PCT