Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01989 ATGGGCTCATTCTCGGGCACTTGTGAAATTGTTGAAGCAAGGGAAGACCTAAATACAGTGAAAGATGCAGGGGTATATCCTTCCAGTTCTGGATATAGTGTTGCTAAGAAAAATCTAGATGATGATATTAATAAGCTGTTTGAATCAATTTCTCTTAAATCTTCATCAAGGGATTTGAGCTTTCTACCAGATGGAACAAGTCCTAAGATGAAAAGTGCATTAAAAAAGCCAATCAAAATGGGTGTACCTCGATCCCCACGAGTTGGGACTTCTGAGCCGGTGACTTTGAAGCAGGCGTTAAGAGACCTATGTATATCTAAGGCATCAGAAATGGCTGCTATGAGAAGGTTATCAAAGTCAGCAGCTTCTCCAAGAATATCAGAGGTTGGGAAGATACAGACACTGTACAATTCCGTTGTCGCTGATGCTAGGAGATCTGGGCCTTCTAATGTTGAGAGTAAAGGGAGTTCAACTGAAATATCCCTGGTGCTAGAAGAAAGCAACTCACTAGTCTTGAATAAAGAATTATATCAGTCTCATCAAACTTCCAATAGCTCATCATCGAGCCAAAATTTTCATTCTTCCAAAATTGCAGTGGCTACCACACAAAATGATACGCGGGCTTCATTGATCCAAAGTGATTTGGAATGTTCATTGACTAAAGATGGGGTATCATCTCAACCATCAGAACCCACTCAAATAGAAAAACAAATGTATGCTTCTTCTTCATCTAGTTGTAACACCAATGGAAGTACAGTAGAGTTGCCTGAAAAGGATTCTTCCCTTAAAAAATTAGGAAATAAAGCATCTATATCAAAGAATGTGCGGAAAGGTATGTTAGAAGCAATATCTTCCTCATCTACTTCAGTACATGGCAATAGAGTGTGCAAAATTTCACGCAATAGCACCCGAACAGTAAAATCGGTCATAAAAAACAAGAACGTGGGTAAGAAGAAACTAAAGCAGGGTTCTGTTTCCCCATCCAATGAAGCAAATATCAAGCCAGTTCCTGCTACTACTCCACTTGTTTGCGAGAGATGTTGGTGTGCAATAGAAAATACAAATACAGAAAACAGCAAAGGTATTATAACATCGGGCTCTATCAGCCCTGCAGATGGAATAAACTTGAAGAGTGTGATCTCTGGGTCAGAATCTACGGGTTGTAACAGCGGCAGAGAAGTAACAAAAGTGAAAAAGAATACCCGATTGAAAGAGCAGCTTGAATTTTCACAAAGTTCAAAGAGTAGCCAAGGTGACTACAGTAGTAGTACAAGTACCAGCGACGAGAGTAATGTCAGCGGTTCTAGTTGTGGCAATAGGCCTCACATGTCAAAGGATTTTAGATGGCAAGCCATACGAGATGCTCAAATGCAGCATGGAGTCTTGGGCTTGAGACACTTCAATCTTTTGAAGAAACTTGGTTGTGGAGACATTGGTACTGTATATCTTTCTGAACTAATTGGTCAAAATTGTTTGTTTGCTATTAAAGTAATGGACAACGACTTTTTGGCAAGAAGGAAAAAGATGCCTAGGGCTCAAACTGAAAGGGAAATATTACGAATGCTGGATCATCCTTTTCTTCCAACACTCTTTGCACAGTTTACATCAGAAAACCTGTCATGTCTAGTCATGGAGTATTGTCCAGGAGGAGATCTTCATGTTCTACGTCAGAAACAGCTTGGCCGATGTTTTTCAGAGCCAGCAGCTAGGTTTTACGTCGCCGAAGTCCTTCTTGCGTTGGAGTATTTGCACATGCTTGGAGTTGTTTACCGTGATTTGAAACCAGAAAACATTCTTGTTCGAGAAGACGGTCACATTATGCTCACAGATTTTGACCTGTCACTCAGGTGCGACGTTAACCCAACACTTCTAAAATCATCGTCTGATATAGATCCTGCCAAGGTTTCTGCACAGTCAAATTGCATCGAGCCATTCTGTATTGAACCATCTTGTCAAGTTCCATGCTTCAGTCCTAGATTCTTACCTCCTTCAGCAAAAGCAAGGAAACAAAAAGCCGATCTTGCTGCTCATATCAGATCATTGCCACAGCTTGTGGCAGAGCCAACCGATGCAAGATCAAATTCGTTTGTTGGTACTCATGAATACCTAGCACCTGAGATCATCAAAGGAGAGGGACATGGAGCTGCTGTTGATTGGTGGACATTTGGGGTTTTCCTTTATGAGCTTTTATATGGTAGAACACCCTTCAAAGGTTCTAACAATGAAGAAACGTTAGCCAACGTTGTGTTGCAAAATCTCAGATTCCCTGATAGCCCATTTGTTAGTTTCCAAGCGAGGGATCTAATTAAAGGATTGTTAGTTAAAGAGCCTGAAAACCGTTTGGGTACATTGAAAGGCGCTGCGGAGATTAAACAACATCCATTCTTTGAAGGCCTTAATTGGGCGTTAATACGTTGTGCTATCCCACCAGAACTTCCAGACCTTTGTGAATTTGAGTTGGGAGTTTCAGACATGATCGCACAGTCCCAAGGCAGCGGTGGTAAATATTTAGAGTGTGCAACAACAGGAGAACAAGTGGAATTTGAGTTGTTTTAG 2556 0.4108 MGSFSGTCEIVEAREDLNTVKDAGVYPSSSGYSVAKKNLDDDINKLFESISLKSSSRDLSFLPDGTSPKMKSALKKPIKMGVPRSPRVGTSEPVTLKQALRDLCISKASEMAAMRRLSKSAASPRISEVGKIQTLYNSVVADARRSGPSNVESKGSSTEISLVLEESNSLVLNKELYQSHQTSNSSSSSQNFHSSKIAVATTQNDTRASLIQSDLECSLTKDGVSSQPSEPTQIEKQMYASSSSSCNTNGSTVELPEKDSSLKKLGNKASISKNVRKGMLEAISSSSTSVHGNRVCKISRNSTRTVKSVIKNKNVGKKKLKQGSVSPSNEANIKPVPATTPLVCERCWCAIENTNTENSKGIITSGSISPADGINLKSVISGSESTGCNSGREVTKVKKNTRLKEQLEFSQSSKSSQGDYSSSTSTSDESNVSGSSCGNRPHMSKDFRWQAIRDAQMQHGVLGLRHFNLLKKLGCGDIGTVYLSELIGQNCLFAIKVMDNDFLARRKKMPRAQTEREILRMLDHPFLPTLFAQFTSENLSCLVMEYCPGGDLHVLRQKQLGRCFSEPAARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLTDFDLSLRCDVNPTLLKSSSDIDPAKVSAQSNCIEPFCIEPSCQVPCFSPRFLPPSAKARKQKADLAAHIRSLPQLVAEPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGVFLYELLYGRTPFKGSNNEETLANVVLQNLRFPDSPFVSFQARDLIKGLLVKEPENRLGTLKGAAEIKQHPFFEGLNWALIRCAIPPELPDLCEFELGVSDMIAQSQGSGGKYLECATTGEQVEFELF 851
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01989 851 ProSiteProfiles Protein kinase domain profile. 467 796 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g01989 851 PANTHER FLIPPASE KINASE 1-RELATED 1 851 - -
Car04g01989 851 CDD STKc_phototropin_like 465 815 - -
Car04g01989 851 SUPERFAMILY Protein kinase-like (PK-like) 443 812 IPR011009 -
Car04g01989 851 SMART serkin_6 467 796 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g01989 851 ProSitePatterns Serine/Threonine protein kinases active-site signature. 588 600 IPR008271 GO:0004672|GO:0006468
Car04g01989 851 MobiDBLite consensus disorder prediction 382 441 - -
Car04g01989 851 Gene3D Phosphorylase Kinase; domain 1 465 550 - -
Car04g01989 851 Pfam Protein kinase domain 693 796 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g01989 851 Pfam Protein kinase domain 468 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g01989 851 MobiDBLite consensus disorder prediction 220 266 - -
Car04g01989 851 MobiDBLite consensus disorder prediction 220 256 - -
Car04g01989 851 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 851 - -
Car04g01989 851 MobiDBLite consensus disorder prediction 406 440 - -
Car04g01989 851 Gene3D Transferase(Phosphotransferase) domain 1 551 620 - -
Car04g01989 851 Gene3D Transferase(Phosphotransferase) domain 1 693 809 - -
Car04g01989 851 MobiDBLite consensus disorder prediction 68 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g01989 Car-Chr4 23770534 23776594 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g01989 1 851 AGC Kinase Gene Family AT3G52890 52.860 0.0 846
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Car04g01989 Pkinase 1.2e-34 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02588 03 71804779 71809413 Car04g01989 04 23770534 23776594 ECH
Car04g01989 04 23770534 23776594 Car04g01989 04 23770534 23776594 ECH
Car03g02421 03 70105135 70106650 Car04g01989 04 23770534 23776594 PCT
Car03g02588 03 71804779 71809413 Car04g01989 04 23770534 23776594 PCT