Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01987 ATGTCTCAAAAGCACTTACACGAGCTTCTCAAAGAAGACCAAGAACCATTTCTTCTAACCAACTACATTTCAAACAAACGTAACCAACTGAAAAGACAATCCCCAAACACAACTTTACAATTGAaaaaacaaaaaccaccaacaacaacaacaaTTAACCTATGCAAAAACGCTTGTTTCCTCTCATTCCAAAACACACCCGATATTAAAAAATCACCAATCTTCGAATTAAATTCACCGGTTAAAAAAAGTCCACGTGGATCCTCCAACGCTATTTTCCTTCAAATCCCAGCCAAAACGGCGTCGCTTTTACTCGAAGCCTCACTCAGGATTCAGAATAAAAAACCGCATTGCAAAAATAAACCGTTCCGGTTGGGTTCGTTTTTCAAGAAATTAACGCAACGAAACAGAAACAAAAAAAGTGAATCAATTGAAGCTAAGAAAGAGGTGGGATCCTGTGAGGTGGGGTACAGGTGTTCTTCTTGGAATGGAAGAACGAGTAGTGCGGTGTGGTCGGAGAGCAACGAGGATAAATCGTTGGATATGGAAACTTCGTGTAGTGGACATTCGTGTGACTATGTTGAACAAGTTCAATTTGTGATGAACAAGGACAAAGAAAATGGAGATTGTGCTTGTTTTCATCATCGTCGATTTTTCTGTGAAAGTCCTTTTCGTTTTGTTCTTCAAAGGACTGCTTCCTCCTCTTCCGCCCGCCGTACGCCGGATTTTCTCTCGCCGGTGGGTTCACCTACTCACAATCAAACTGAGGACAAAGAAAATAATGGAGGTGACGAAGTCAACAAATTCCAATCAGGGGAAGATGAGGAAGAGAAGGAACAGTGTAGTCCAGTATCTGTTTTAGACCCACCATTTGAAGATTATGATGATGATTGCCATGAAAACGACGATCAAGAGGGTGGTTTTGATTTGGAATGTAGCTACGCCAATGTACAAAGAACCAAGCAACAACTATTAGACAGGCTTCGAAGATTTGAGCAACTTGCGGAGTTAGATCCACTACAACTTGAGAAAAGAATGCACGACGAAGAAGACATCGATTACGAAACATTTTTCGGAAAGTACGATGTTGAAGAAGATGATAGTGAAGCACCATGTGAAGAGAAGTCCATGAAAGAAATAGTTTGTGAAATCCTCTCCCGTTCACGTGTTCATGATAAATGGCAAGATCCAAAAGTTCTTAAGAAACTTGTTTATGATCTCATTAAGGAGGAAGAGAAAGCACTTACTTTTTCACATGATATGAACATGGTAATGAAAAGGGTGTGCAAGAAGCTGGAGTTGTGGAAAGAAGTGGAATCTAACACCATTGATATGATGATAGAAGATGATTTTTCTAGAGAGGAAAATGGATGGAAGAAAAATGATGTGGAGACAAAAGAGCTGGCTTGTGAGCTTGAGGTTGCTATTTTTTTATTTCTAGTTGATGAATTTTCAGAGGAATTAGTATGTTAA 1473 0.3883 MSQKHLHELLKEDQEPFLLTNYISNKRNQLKRQSPNTTLQLKKQKPPTTTTINLCKNACFLSFQNTPDIKKSPIFELNSPVKKSPRGSSNAIFLQIPAKTASLLLEASLRIQNKKPHCKNKPFRLGSFFKKLTQRNRNKKSESIEAKKEVGSCEVGYRCSSWNGRTSSAVWSESNEDKSLDMETSCSGHSCDYVEQVQFVMNKDKENGDCACFHHRRFFCESPFRFVLQRTASSSSARRTPDFLSPVGSPTHNQTEDKENNGGDEVNKFQSGEDEEEKEQCSPVSVLDPPFEDYDDDCHENDDQEGGFDLECSYANVQRTKQQLLDRLRRFEQLAELDPLQLEKRMHDEEDIDYETFFGKYDVEEDDSEAPCEEKSMKEIVCEILSRSRVHDKWQDPKVLKKLVYDLIKEEEKALTFSHDMNMVMKRVCKKLELWKEVESNTIDMMIEDDFSREENGWKKNDVETKELACELEVAIFLFLVDEFSEELVC 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01987 490 MobiDBLite consensus disorder prediction 237 286 - -
Car04g01987 490 PANTHER OS04G0572500 PROTEIN 1 490 - -
Car04g01987 490 PANTHER - 1 490 - -
Car04g01987 490 MobiDBLite consensus disorder prediction 257 282 - -
Car04g01987 490 MobiDBLite consensus disorder prediction 237 256 - -
Car04g01987 490 Coils Coil 129 149 - -
Car04g01987 490 Coils Coil 314 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g01987 Car-Chr4 23725693 23730814 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g01987 3 489 TRM (TON1 Recruiting Motif) Superfamily AT2G36420 32.227 1.70e-45 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01987 - - gmx:100814311 476.863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g01987 04 23725693 23730814 Car04g01987 04 23725693 23730814 ECH
Car03g02582 03 71654021 71657661 Car04g01987 04 23725693 23730814 PCT