Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01984 ATGAAAATGGAAGACCACCATAACAATCATGGTcaccaccaccatcatcaccatcaacaacaacaATATGGAGACATAACAACTGATCTAAGACAACTAGTGAACGGAACAAGGTTCCCTTCATCGGAGGAGTTTTTTCCCGGTCATCGGAATCTAACAGCTTTGGTCACTCCACAACAACAACAACAGTACGAGATGATGATGTTAGGTCATCGTGGAGTAGTACTTGAAGATTTCAATACTAGCATGAATACAATTGTTCCTCCTCCTCTTCCTCcaacaacaacaacaacaacaacaacaaGTGTTTCAGTTTCAACTCCTGAGACCGCAGGATGTATCGGTGGAGACGCATCCACTGGAAGATGGCCCAGACAAGAAACACTTACTCTTCTTGAGATCAGATCTCGTCTTGACCCTAAATTTAAAGAAGCTAATCAGAAAGGTCCCTTGTGGGATGAAGTCTCTAGGATAATGTGCGAAGAACATGGATACCAAAGGAGTGGAAAAAAGTGCAGAGAGAAATTTGAGAACCTTTACAAATATTACAAGAAGACAAAAGAAGGTAAAGCTGGAAGACATGATGGGAAGCATTACAGATTCTTTCGTCAACTTGAAGCTTTATATGGTGAAAACAGTAACACAACTTGTTTACCAGAAACCAATTTTGTCAACAACTTCAATTTCCAAAAAAATCAAGAGATTTTTCATCACaataataatattaataatagtaacaataagaataTTTGTGATGATCATAGCCTAAGTCTCACTAACTCAACTGATTTTGACACATCATCATGTGATGATGATGACAATGATCAAAGCAATGATAAGAGGAGGAAGAGAAAGAGTGGAAGAAGGAGTTGGAAGGTGAAGATAAAAGAGTTCATTGATTCACAAATGAAGAAGCTTGTGGAGAAGCAAGAGGAGTGGTTGAGTAAGCTTGTGAAGACACTTGAGGAGAAGGAAAAGGAGAGGGTTTTAAGAGATGAAGAGTGGAGGAAACAAGAGGTGAAAAGGGTAGAAAGGGAACAAAAATTTTGGGCTAATGAGAGAGCATGGATTGAAGCTAGGGATGCTGCTTTAATGGAAGCTTTGAAGAATATTAATGGAAGAGAAATGTTAATGAAGGTTGAAGATCATGATCATGATGAAGGTGTTATAATGGAAAGTCATCATGAGATTCAAAACAACATTGAAAAGATGAATGAAGCTGAATCTGAAGAAGGGAACAAGAAGAGAAAGGAGAAAACAAGAAGTTGTTTTTACTTTGATAATAATGAACAATCTTCTATGTATAATAATCAAGGAAGTACTTATTGTGATGTTAATGATCAACAAAGAGAGGAGAGTATTGTGAAGCTACAAAGGAATATTGATCATGATGGTACTTCACCTTCCAATTCCAATGTTGGAAGCTTTCCCTTCTTGATTAGTGAGGGTGGAAATTTGTGGGAGAATTTTGGATTGAAGATCAATAAAGAAAACCAAAACCATTGA 1506 0.3539 MKMEDHHNNHGHHHHHHHQQQQYGDITTDLRQLVNGTRFPSSEEFFPGHRNLTALVTPQQQQQYEMMMLGHRGVVLEDFNTSMNTIVPPPLPPTTTTTTTTSVSVSTPETAGCIGGDASTGRWPRQETLTLLEIRSRLDPKFKEANQKGPLWDEVSRIMCEEHGYQRSGKKCREKFENLYKYYKKTKEGKAGRHDGKHYRFFRQLEALYGENSNTTCLPETNFVNNFNFQKNQEIFHHNNNINNSNNKNICDDHSLSLTNSTDFDTSSCDDDDNDQSNDKRRKRKSGRRSWKVKIKEFIDSQMKKLVEKQEEWLSKLVKTLEEKEKERVLRDEEWRKQEVKRVEREQKFWANERAWIEARDAALMEALKNINGREMLMKVEDHDHDEGVIMESHHEIQNNIEKMNEAESEEGNKKRKEKTRSCFYFDNNEQSSMYNNQGSTYCDVNDQQREESIVKLQRNIDHDGTSPSNSNVGSFPFLISEGGNLWENFGLKINKENQNH 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01984 501 MobiDBLite consensus disorder prediction 1 24 - -
Car04g01984 501 ProSiteProfiles Myb-like domain profile. 115 180 IPR001005 -
Car04g01984 501 Gene3D - 123 185 - -
Car04g01984 501 MobiDBLite consensus disorder prediction 86 119 - -
Car04g01984 501 PANTHER - 41 406 - -
Car04g01984 501 PANTHER - 407 495 - -
Car04g01984 501 PANTHER TRIHELIX TRANSCRIPTION FACTOR PTL 41 406 - -
Car04g01984 501 PANTHER TRIHELIX TRANSCRIPTION FACTOR PTL 407 495 - -
Car04g01984 501 Coils Coil 307 327 - -
Car04g01984 501 CDD GT1 122 187 - -
Car04g01984 501 MobiDBLite consensus disorder prediction 263 286 - -
Car04g01984 501 Pfam Myb/SANT-like DNA-binding domain 122 208 IPR044822 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g01984 Car-Chr4 23672857 23675465 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g01984 408 497 Trihelix Transcription Factor Family AT5G03680 35.644 6.21e-08 53.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Car04g01984 Myb_DNA-bind_4 6.4e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01984 - - mtr:MTR_1g060990 593.964
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g01984 04 23672857 23675465 Car04g01984 04 23672857 23675465 ECH
Car03g02580 03 71628931 71630309 Car04g01984 04 23672857 23675465 PCT