Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01982 ATGATGATAATAGAATGTTGTGTCTCTGGAAATGCAATACGTGTCAGTTCCACTCCCTCTAACACAAAATATCCATGTAACATTAACAACATGTTTGCAAGAATTACAAGAAGACCATTATCTCTGTCTATAATCTCCACCACTTTCTCTGCTTTAATCTTCTCACTTCCTCCTCCACCTTCCTTTTCTTCTTCCAAATTTCCAATAGCAGACTTCTATGAAATCCCCAATTCCGGTGGTGTTACTGTTAAGGCTTTGGATCTCCTTCTTGGTTCTGGTGCTGTTCCCTCAGATGGGGACCAGGTTGAGATTCATTACTATGGTAGGCTGGCAGCAAAACAAGGATGGCGTTTTGATTCAACCTATGACCACAAAGATGAGAATGGTGATCCTACTCCTTTTGTCTTTGTCCTTGGCTCTGGTAAGGTAATTGGTGGAGTTGATGTGGCAGTGAGATCAATGAAAGTAGGTGGTATTCGTAGAGTCATCATACCTCCATCACTTGGCTATCAAAACACATCACAGGAACCTCTTCCACCTAATTTCTTTGACAGGCAGAGGCTATTCACTACCATTTTTAATCCAACTCGCCTTGCAAATGGTGAAGGCTCCACTTTAGGGACACTTATATTTGATATTGAACTGGTTGGCCTGAGGCATTAG 663 0.4178 MMIIECCVSGNAIRVSSTPSNTKYPCNINNMFARITRRPLSLSIISTTFSALIFSLPPPPSFSSSKFPIADFYEIPNSGGVTVKALDLLLGSGAVPSDGDQVEIHYYGRLAAKQGWRFDSTYDHKDENGDPTPFVFVLGSGKVIGGVDVAVRSMKVGGIRRVIIPPSLGYQNTSQEPLPPNFFDRQRLFTTIFNPTRLANGEGSTLGTLIFDIELVGLRH 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01982 220 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 95 216 IPR001179 GO:0003755
Car04g01982 220 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP17-1, CHLOROPLASTIC 15 220 IPR044197 -
Car04g01982 220 Gene3D - 70 218 IPR046357 GO:0003755
Car04g01982 220 SUPERFAMILY FKBP-like 85 219 - -
Car04g01982 220 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 99 219 IPR001179 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g01982 Car-Chr4 23646801 23648136 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g01982 96 219 Calmodulin-binding Proteins AT5G48570 36.000 4.96e-14 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01982 - - cam:101514460 436.417